Kosakonia radicincitans: A3780_03150
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Entry
A3780_03150 CDS
T04579
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00310
Lysine degradation
krd01100
Metabolic pathways
krd01110
Biosynthesis of secondary metabolites
krd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
A3780_03150
Enzymes [BR:
krd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
A3780_03150
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APG16607
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All DBs
Position
694872..697010
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELEQALQAQGFHIIWPRNSTDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTHSTMDVSAQDMRMALWFFEYALSVADEIASRIVQY
TKEYLENITPPFTRALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVTPLWLKPGRNALGILGGIPRREFTHASIEQKVATTAGAHWPVH
AVITNSTYDGLLYNTDWIKKTLDVPSIHFDSAWVPYTNFHPIYAGKSGMSGERVPGKVFF
ETQSTHKMLAAFSQASLIHIKGEYDEDTFNEAFMMHTTTSPSYPLVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLKDEADGWFFDIWQPEEIDEADCWPVAPGEAWHGFRDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLMEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQH
DLPRLMLQAFDVLPDMKLTPHQAWQRQIQGEVETVELEKLIGRISANMILPYPPGVPLVM
PGEMITDASRPVLDFLLMLCAIGRHYPGFETDIHGAKRNEEGTYRVRVLKAR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattattgccatcatgggaccccatggcgttttctacaaagatgagccaatcaag
gagctggaacaggcgctacaggcgcaagggtttcatattatctggcccagaaacagcacc
gacttactgaagtttatcgagcataacccgcgtatttgcggcgtgatctttgactgggat
gagtactccctcgatctgtgcagcgagattaatcagctaaatgaataccttccgctgtat
gcgtttattaatacccactccaccatggatgtcagcgcgcaggatatgcgtatggcgctg
tggtttttcgaatacgctctgagcgtggcggacgagattgcctcgcggattgtccagtac
accaaagagtatctggaaaacatcacgccgccgtttacccgggcgctgttcacctatgta
aaagagggaaaatacaccttctgcacgcccgggcatatggcagggacggcgtaccagaaa
agcccggtaggctgcttgttttatgatttcttcggcggcaatacgctcaaagcggatgtt
tcgatctctgtgactgagctgggatcgctgctggatcataccggtccgcatctggaggct
gaagagtatatcgcccgtacgtttggtgccgagcagagctatatggtgaccaacggcaca
tcgacctccaacaaaattgttggtatgtatgccgcgccagcgggcagtaccctgttgatt
gaccgtaactgtcataaatcgctggcgcatctgttgatgatgagcgatgtcacgccgctg
tggctaaagccgggacgcaacgcactggggatcctggggggtataccgcgccgcgagttt
acccatgccagcatcgaacaaaaagttgcaaccacggcgggggcgcactggccggtacac
gcggtgattactaactccacgtatgatggcctgctgtacaacaccgactggattaaaaaa
acgctggatgtaccgtcgatccatttcgattccgcctgggtgccgtacaccaattttcac
cctatttatgccggaaaaagcggcatgagcggcgagcgggtgccgggaaaagtcttcttt
gaaacgcagtcgacgcacaaaatgttggcggcattctcgcaggcatcgttgattcatatt
aaaggtgaatatgatgaggacacgtttaacgaagcctttatgatgcacaccaccacatca
ccgagctatccgctggtggcatcgatcgaaacggccgcagcgatgctacgcgggaaccct
ggtaagcgcttaattaaccgctcggttgaacgggcgctgcattttcgcaaagaggtgcaa
cggctgaaggatgaagccgacggctggttctttgatatctggcaaccggaagagattgat
gaagctgactgctggccggtcgcaccgggtgaagcatggcatggttttcgcgatgcggat
gccgaccatatgtttctcgacccggtcaaagtgaccatcctgacgcccggtatggacgag
caagggaacatgagcgaggaagggatcccggcggcgcttgtagcgaagttcctcgatgaa
cgtggcgtggtggtggaaaaaaccgggccgtataacctgctgtttctgttcagtatcggc
atcgataaaacccgggcaatggggttgttgcgtgggctgatggagttcaagcgtgcctac
gatcttaatctgcgggtgaagaacatgttgccggatctctatgctgaagatcctgatttc
tatcgcaatatgcggattcaggatctggcgcaggggatccataagcttattcgccagcat
gatctaccgcgtttgatgttgcaggctttcgatgtgctgccggatatgaagttgacgccg
catcaggcatggcagcggcagatccagggcgaggtggaaacggtagaactggaaaaactg
atcggacggatctcggccaatatgatcctgccttatccgcctggcgtaccgctggtgatg
ccgggtgaaatgatcactgacgccagccgcccggtgcttgatttcctgctgatgctatgt
gcgattggccgccactatccgggctttgaaaccgatattcacggcgcaaaacgaaatgag
gagggcacttaccgggtacgagtcctaaaagcccgctaa
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