Kosakonia radicincitans: A3780_04495
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Entry
A3780_04495 CDS
T04579
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00730
Thiamine metabolism
krd01100
Metabolic pathways
krd01240
Biosynthesis of cofactors
krd04122
Sulfur relay system
Module
krd_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A3780_04495
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
A3780_04495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
krd03016
]
A3780_04495
Enzymes [BR:
krd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
A3780_04495
Transfer RNA biogenesis [BR:
krd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
A3780_04495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Diphthami_syn_2
Rhodanese
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
APG16856
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All DBs
Position
977669..979117
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHIEVRAKDENQR
LAIRDALTRIPGIHHILEVEDVPFTSLHDIFEKALVQYREQIEGKTFCVRVKRRGKHEFS
SIEVERYVGGGLNQHVESARVKLTHPDVTVNLEIEDDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISYDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEAHFDFAILDQVVAEASNIDIREIAQQTQQEVVEVETVNGFGPNDVVLDIRSIDEQD
DKPLKLEGVDVVSLPFYKLSTKFGDLDQSKTWLLWCERGVMSRLQALYLREQGFQNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgcttg
cgctttattaaaattctgaccgggaacattcgtaacgttctgaagcactacgacgaaacc
ctggccgttgtgcgccactgggaccatatcgaagtccgcgccaaagatgaaaaccagcgt
ctggctattcgcgacgcgctgacccgcattccggggatccaccatattctggaagtggaa
gatgtgcctttcacttctctgcacgatatttttgagaaagcgctggtgcagtatcgcgag
cagattgaaggtaaaaccttctgcgtgcgcgtgaaacgccgtggtaaacatgaattcagc
tctattgaagtggaacgttacgtgggcggcgggctgaatcagcatgtcgaatctgcgcgc
gtgaagctgacgcacccggatgtgacggtgaatctggaaatcgaagatgaccgtctgctg
ctggtaaaaggccgttatgaagggattggcggcttcccgattggcacccaggaagatgtc
ctgtcgctgatttccggcggcttcgactccggcgtttccagctatatgctgatgcgtcgc
ggctgccgcgtacactactgcttctttaatctcggcggcgcagcccatgaaattggcgtt
cgccaggtggcgcattatctgtggaaccgctttggcagttcgcaccgcgtgcgttttgtg
gcaatcaattttgaaccggtggtcggcgagatcctcgaaaaagtcgatgatggccagatg
ggcgtggtactgaaacgcatgatggtgcgcgctgcgtcgaaagtcgctgagcgttacggc
gtgcaggcgctggtaaccggtgaagcgctgggacaggtttccagccagacgctgaccaac
ctgcgtctgattgataacgtctccgatacgctgatcctgcgcccgctcatctcttacgat
aaagagcacattatcgatctggcgcgtgaaattggtaccgaggattttgcccgcacgatg
ccggaatattgcggcgtgatttccaaaagcccaacggtgaaggcggtgaaagcgaagatc
gaagcggaagaagcgcattttgatttcgctatcctcgaccaggttgtggcggaagccagc
aatattgatatccgtgaaatcgctcagcaaacccagcaagaggtggtggaagttgaaacg
gttaacggttttggcccgaacgatgtggtgctggatatccgttcgattgatgaacaggat
gataagccgctgaagctggaaggcgttgatgtcgtgtcgctgccgttctacaagctgagc
acgaagtttggcgatctggatcagagcaaaacctggctgctgtggtgcgagcgtggcgtg
atgagccgcttgcaggcgctctatctgcgcgagcagggcttccagaatgtgaaggtttat
cgcccgtaa
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