Kosakonia radicincitans: A3780_12820
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Entry
A3780_12820 CDS
T04579
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
krd
Kosakonia radicincitans
Pathway
krd00220
Arginine biosynthesis
krd00791
Atrazine degradation
krd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
A3780_12820
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
A3780_12820
Enzymes [BR:
krd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
A3780_12820
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
RnfC_N
HlyD_3
ATP-grasp
ATP-grasp_5
NQRA
Cnn_1N
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
APG18395
LinkDB
All DBs
Position
complement(2799423..2803037)
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AA seq
1204 aa
AA seq
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MFNTVLIANRGEIACRAIRTLQRLGIKSVAVYSDADKNAEHVKQADIAVALGGEKASDSY
LRIDKIIAAAQETGAQAIWPGYGFLSESLPFAAACEQAGIVFVGPTAQQIGEFGLKHRAR
ELAAEAGVPMTPGTGLLDSLDAALAAAANIGYPVMLKSTAGGGGIGLTRCADAQALHDAW
ESVRRLGEQFFSDAGVFVERCIDRARHIEVQIFGDGKGNVVALGERDCSLQRRNQKVVEE
TPAPNLPATTREALLSAAVQLGKLVNYRSAGTVEFIYDAQRDAFYFLEVNTRLQVEHPVT
ECVTGLDLVECMLRVAADEAIDWARLQQAPQGAAIEVRIYAENPLKNFQPSPGVLTEVAF
PPDVRVDTGVTTGSEVSAFYDPMIAKLIVQGASREEALAKLQAALDTTRLHGITTNLDYL
RQITASEAFRNGSMWTRMLDSFEAHAAVIEVLQPGTWSSVQDYPGRLGYWDIGVPPSGPM
DDFAFRLANRIVGNHDAAAGLEFTLQGPVLQFHSAAVIALTGADCQATLDGEAVPLWQPI
TVNAGQILAYGRAQVGCRAYLAVRNGIDVPQYLGSRSTFALGQFGGHAGRTLKVADLLPI
SRPQLAACTTPAPVSEPQAISPSLIPEYGELWRIGVLYGPHGAPDFFTQDAIDEFFASDW
QVHYNSNRLGVRLVGPKPGWTRPNGGEAGLHPSNVHDCEYAIGAINFTGDFPVILTRDGP
SLGGFVCPVTIAKAELWKVGQVKPGDRIRFYPISMEEAVAREKAQERSIETLHASHLAEF
ATPSLADRDGVSATALVSLPAAAGAPAIVYRQAGDNYILIEYGDNVLDLALRLRVHLLME
QLRKRAHPGVKELSPGVRSLQVRYDSLAISQQELVALLLELESHIGDVSQMKVPSRIVHL
PMAFEDNATLDAVSRYKDTVRATAPWLPNNVDFIQRINGLASREAVKATIFDASYLILGL
GDVYLGAPCAVPIDPRHRLLSSKYNPARTFTAEGTVGIGGMYMCIYGMDSPGGYQLVGRT
LPIWNKFLKNAQFAANEPWLLHFFDQVRFYPVSEAELTQLRDDFREGRATIRIEETVFDF
PQHLQFLRDNAADIAEFRTRQAEAFEAEVERWQLDDQASVAESLPPEVIAEDDDALPVCA
DMSGNIWKVLVNPGDAVTEGQPLVIVEAMKMELAINAPQSGKVKRIACQPGRPVSPGDTL
LWLE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacactgtactgattgccaaccggggcgaaattgcctgtcgcgccatccgcaca
ctgcaacgcctgggtatcaaaagcgtggcggtctattccgacgcggataaaaatgccgaa
catgttaaacaggccgatattgccgtggcactcggcggcgaaaaggccagcgacagttac
ctgcgtatcgacaaaattatcgccgcagcgcaggaaacgggcgcgcaggctatctggccg
ggctacggatttttgtcggaaagcctgccgtttgccgccgcctgcgaacaggctggtatt
gtttttgtcgggccgactgcacaacagattggcgagtttgggctgaaacaccgggcgcgc
gagctggccgccgaggcgggcgtgccgatgacgccgggcaccggtctgctcgactcgctg
gacgcagcgcttgcagccgcagcgaatattggctatccggtgatgctgaaaagcacggcg
ggcggcggcggtattggtctgacgcgctgcgccgatgcgcaggcgctccatgatgcctgg
gagagcgtgcggcggcttggcgaacagttttttagcgacgccggcgtgtttgtcgagcgc
tgcatcgatcgcgcacggcatattgaagtgcagatctttggcgacggcaaaggcaatgtc
gtggcgctcggcgagcgcgactgctcattgcagcgccgcaaccagaaagtggtggaagaa
accccggcgccgaacctgccagccactacccgtgaagcgctgctcagcgcggcggtgcag
cttggcaaactggtcaattaccgcagcgcgggcaccgtggaatttatctacgacgcgcag
cgggatgcgttctactttctggaggtcaacacccgtttgcaggtggagcatccggtcacc
gagtgcgttaccgggctggatctggtcgagtgcatgctgcgcgtggcggcggatgaagcg
attgactgggcgcgtctgcaacaagcaccgcagggcgcggccatcgaagtgcgtatctac
gccgaaaacccgctgaaaaacttccagcccagccccggtgttttaaccgaagtcgctttc
ccgccggatgtgcgtgtggataccggggtgaccaccggcagtgaagtgtcggcattttac
gacccgatgatcgccaaactgattgtacagggtgccagccgcgaagaggcgctggcaaaa
ctgcaggctgcgctcgacaccactcgcctgcatggcattaccacgaacctggattatctg
cgccagatcaccgccagcgaagccttccgtaatggcagcatgtggacgcggatgctcgac
agttttgaagcgcacgcggcggtgattgaggtgctgcaaccgggcacctggagcagcgtt
caggattatccgggtcgccttggttactgggatatcggcgtgccgccttccggcccgatg
gacgattttgctttccgcctggccaaccgcattgtcggtaaccacgacgcggcggcgggg
ctggagttcaccctgcaaggcccggtgctgcaatttcacagcgcagcggtgatcgctctg
accggggcggattgccaggcgacgctggatggcgaagcggtgccattatggcaaccgatc
accgttaacgccggacagattctggcgtatgggcgcgcgcaggtcggctgccgcgcgtat
ctcgcggtacgtaacggcattgatgtgccgcaataccttggtagccgctccacctttgcg
ctcgggcagtttggcggccacgccggacgcacgctgaaagtcgccgatttgctgccgatt
tcacgcccgcaactggccgcctgcaccacgcccgcgccggtgagcgaaccccaggcgata
agcccgtcgctgatcccggagtatggcgaactgtggcgcatcggtgtgctgtacgggccg
cacggcgcgccggatttctttacccaggacgcgatcgacgagttcttcgccagcgactgg
caagtgcattacaactctaaccgcctcggcgtgcggctggtcgggccgaaaccaggctgg
acgcggccaaacggcggcgaggccggtctgcacccctctaacgttcacgactgcgaatac
gccatcggcgcgattaactttaccggcgacttcccggtgatcctcacccgcgatggccca
agcctcggcggttttgtctgcccggtgaccatcgctaaagcagagttgtggaaagtcggg
caggtcaaaccgggcgatcgcatccgcttctacccgatcagcatggaagaggcggtggcg
cgggaaaaagcacaggagcgcagcattgagacgctgcatgccagccatctggcggaattc
gccacgccatcccttgccgatcgcgacggggtttccgccacagcgctggtgtcgctgccc
gccgctgctggcgcgcctgcgattgtctatcgccaggccggggataactacattctgatt
gagtatggcgacaacgtgctggatctggcgctgcgtctgcgcgttcacctgttgatggaa
caactgcgcaaacgggcgcatccgggcgtgaaagagctgtcgccaggcgtgcgctctttg
caggtgcgttatgacagtctcgctattagccagcaggaactggtggcgctgctgttggag
ctggagtcgcacattggcgatgtcagccagatgaaagtgccgtcacgcattgtgcatctg
ccgatggcgtttgaagacaacgccacgctggatgcggtcagccgctacaaagacacggtg
cgcgcgacagcgccgtggttgcccaacaatgtggactttattcagcgcatcaacggtctg
gcgagccgcgaagcggtgaaggcgacgatttttgacgccagctatctgatcctgggcctt
ggcgatgtctatctcggcgcgccctgcgcggtgccgattgatccacgccatcgtctgctg
agttccaaatataacccggcgcgcacctttaccgccgaaggcaccgtcgggatcggcggg
atgtacatgtgcatctacggcatggattcccccggcggctatcaactggtgggccgcacg
ctgcctatctggaacaagttcctcaaaaacgcgcaatttgccgccaacgagccgtggctg
ctgcacttcttcgaccaggtgcgtttctacccggtaagtgaagcggaactcacccagttg
cgtgacgatttccgtgaaggccgtgccaccatccgcattgaagagacggtgtttgatttc
ccgcagcatttgcagttcctgcgtgataacgccgccgacattgccgaattccgcacccgc
caggcggaagccttcgaggcggaagtggagcgctggcaactggacgatcaggccagcgta
gcggaaagcctgccgccggaagtgattgccgaagatgacgacgcattgccggtgtgcgcc
gatatgagcggcaacatctggaaagtgctggttaatcccggcgatgcggtgacagaaggc
cagccgctggtgatcgtcgaagcgatgaagatggagctggccatcaacgcgccgcagagc
ggcaaggttaaacgcatagcctgccagccggggcgtccggtcagccccggcgacacgctg
ctgtggctggaataa
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