Kocuria varians: CIB50_0000167
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Entry
CIB50_0000167 CDS
T06882
Symbol
hsdM
Name
(GenBank) Type I restriction enzyme EcoKI M protein
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
kvr02048
]
CIB50_0000167 (hsdM)
Enzymes [BR:
kvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
CIB50_0000167 (hsdM)
Prokaryotic defense system [BR:
kvr02048
]
Restriction and modification system (R-M system)
Type I R-M system
CIB50_0000167 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
MTS
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QMS55483
UniProt:
A0A7D7Q7K6
LinkDB
All DBs
Position
complement(180108..181676)
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AA seq
522 aa
AA seq
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MARRAAKTKPAKTLEQTLWDAADKLRGNQEPSEYKHVVLGLVFLKYVSDRFEERREQLKG
ELAAEGIKPERIESFLEDRDEYASQNVFWVPSLARWGYVQSVAKQPEIGQQIDQAMDLIE
KENPSLRGVLPRNYGRDGLDKRRLGELVDLIGSIGFTETDDHGADDVLGRVYEYFLGQFA
GKETGKDAGAFYTPRSVVRTLVEMLEPYKGRVYDPAAGSGGMFVQSAEFVKAHGGKRTDI
SVYGQEFTDTTWKLAKMNLALRGIEADMGSHSADSFTEDLHQDLRADFVIANPPFNVSDW
WDAKLGDDPRWKYGTPPPGNANFAWVQHFIHHLAPNGTAGFVLANGSLSSKSSGEGEIRQ
RLVEAGLVDCIVAMPDKLFFNTGIPVSLWFVSKGRDGNGHRARKGEVLFIDARKLGDMES
RRLRVLSDGDIAQIADTYHEWRNHDGNYKDVPGFAKSATIDEIEKHDFVLTPGRYVGSEE
AEVDDEPIDEKIERLTKELFAEFQRGRELEDEVKRRLGGIQL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgggccgcgaagacgaagccagcgaagacgctggaacagacactgtgggat
gccgctgacaaactcaggggcaaccaggagcccagcgagtacaagcatgtcgtgctgggt
ctggtattcctcaagtacgtctccgaccggttcgaggagcgccgcgagcagctcaagggc
gagctggccgccgagggcatcaagcccgagcggatcgagtcgttcttggaggatcgcgac
gagtacgcgagccagaacgttttctgggtaccatccctcgcgcgatggggctacgtgcag
tcggtggcgaagcagcctgagatcggccagcagatcgaccaggcgatggatctcatcgag
aaggagaacccctccctgcgcggcgtgctccctcgcaactatggccgggacggtctcgac
aagcgccgtctcggtgagctggtcgatctcatcggttcgatcggcttcactgagaccgac
gatcacggcgcagacgatgtgctcggccgcgtgtacgagtatttcctgggccagttcgcg
ggcaaagagactggtaaggacgccggagcgttctacacgccacgctccgtcgtccggacg
ctcgtggagatgctggagccctacaagggtcgcgtctatgacccagcagcaggctctggc
ggcatgttcgtgcagtcagcggagttcgtgaaggcccacggcggcaagcgcactgacatc
tctgtgtacgggcaggagttcaccgacacgacctggaagctcgcgaagatgaacctcgct
ctgcgaggcatcgaagctgacatgggatcgcactcggcggactcgttcaccgaggatctc
caccaggacctccgcgctgacttcgtcatcgcgaacccgccgttcaacgtctctgactgg
tgggacgcgaagctcggcgacgacccgcgctggaaatacggcaccccaccgccaggtaac
gcgaacttcgcgtgggtccagcacttcatccaccatctcgctcccaacggcacggcaggc
ttcgtgctcgccaacgggtcactgtcttccaagagcagtggcgagggcgagatccgtcag
cggctcgtcgaggccggcctggtcgactgcattgtcgcgatgccagacaagctgttcttc
aatactggcatccctgtgtcactgtggttcgtctccaaggggcgtgacggcaacgggcac
cgcgcgcgcaaaggggaggtgctgtttatcgacgcccggaagctcggggacatggagtca
cgccgcctgcgtgtgctttcggatggtgatatcgctcaaatcgcggacacttaccacgag
tggcgaaaccacgacggcaactataaagatgtccccggtttcgcgaagtcagccacgatc
gacgagatcgagaaacacgacttcgtgcttaccccaggccgatatgtcggtagcgaggag
gcggaagtcgacgacgagccgatcgacgagaaaatcgaacgcctcacgaaggaacttttt
gcagagttccagcgcggccgcgagctcgaggatgaggtcaagcgtcggctgggaggcatt
cagctatga
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