Kocuria varians: CIB50_0000452
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Entry
CIB50_0000452 CDS
T06882
Symbol
bioD
Name
(GenBank) ATP-dependent dethiobiotin synthetase BioD
KO
K01935
dethiobiotin synthetase [EC:
6.3.3.3
]
Organism
kvr
Kocuria varians
Pathway
kvr00780
Biotin metabolism
kvr01100
Metabolic pathways
kvr01240
Biosynthesis of cofactors
Module
kvr_M00123
Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
CIB50_0000452 (bioD)
Enzymes [BR:
kvr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.3 dethiobiotin synthase
CIB50_0000452 (bioD)
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Gene cluster
GFIT
Motif
Pfam:
AAA_26
CbiA
DUF1611
Motif
Other DBs
NCBI-ProteinID:
QMS55759
UniProt:
A0A7D7PZM4
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All DBs
Position
complement(499940..500782)
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AA seq
280 aa
AA seq
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MTTNPLGDLVASLGHAVVVTGTDTDVGKTYATAALVVSGWNAERRRIAVYKPQQTGMRGG
EPGDVDDVARLALAAGVPSSALTTAEGQRLTEPMAPPPAAAIDGVELLPLDAHVREILEL
QETHDLVIVEGSGGVLVELDGDRHTIADLAVALQEASAGSAASTEPSGAATPYHAAAEAS
GRWGSPDTSEPVSAAERGGGTGSTVLVARPDLGTLNHTLLSLEALLHRDVEVAGVVLGSW
PADPDRLATSNREYLADLPPVAGRRVPLLGAVPRGWGGAA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgactaccaaccccctgggcgacctcgtcgcctccctgggccacgccgtcgtcgtgacg
ggcaccgacacggacgtgggcaagacgtacgccacggcggcgctcgtggtctccgggtgg
aacgcggaacggcgccggatcgcggtctacaagccgcagcagaccggcatgcggggcggg
gaaccgggggacgtcgacgacgtcgcccggctggctctcgcggccggcgtgccttcctcg
gcgctcaccaccgcagagggccagcgtctcaccgagccgatggccccgccccccgcggcg
gcgatcgacggggtggagctgctcccactggacgcccacgtccgggaaatcttggaatta
caagaaacccacgacctggtgatcgtggagggcagcgggggtgtgctcgtggagctggac
ggggaccggcacacgattgcggacctggcggtggcgctgcaggaggcctccgcaggatcc
gcggcatcgaccgaacccagtggggcggccacgccgtaccacgcggcggctgaagccagc
ggccggtggggttctcctgacacgtccgagcccgtgagcgcggcagaacgcggcgggggg
acggggagcactgtgctggtggcccgcccggacctggggacgctgaaccacactctgctg
agcctggaggcgctgctgcaccgggacgtcgaggtggcaggggtggtgctgggcagctgg
cccgcggaccccgaccgcctggcgacctccaacagggagtacctcgcggacctgccaccc
gtcgcgggtcgacgcgttcccctgctgggcgcggttccccgtggctggggcggggccgca
tag
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