Labrenzia sp. PHM005: FJ695_20305
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Entry
FJ695_20305 CDS
T06152
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp00190
Oxidative phosphorylation
labp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FJ695_20305
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJ695_20305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
labp03019
]
FJ695_20305
Enzymes [BR:
labp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
FJ695_20305
Messenger RNA biogenesis [BR:
labp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FJ695_20305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
QDG78010
UniProt:
A0A4Y6S0Q1
LinkDB
All DBs
Position
complement(4493097..4495319)
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AA seq
740 aa
AA seq
DB search
MTETVDVQDTVAAVPDVAGRPVVKFGRDTTDDLLKSPARFMNRELSWLQFNLRVLEEAMN
RNHPLLERVRFLSISANNLDEFFMVRVAGLRGQQRADVTNLSDDGLTPTEQLDKIGEAVH
QLQASQQQIWGELQGEIAEEGIEILRAETLEADERNWLEEYFLSYIFPVLTPLAIDPAHP
FPFIPNLGFSIVFELVPSSGGEGMIALMRVPSQVARFVQMPNSRDGAARFIAVEKVISLF
IGRLFPGYEIRGKGAFRVIRDSDLEIEEEAEDLVRLFESALKRRRRGSAIRLEIQDTTPP
ALREFVAEALDVEDEEIFLAKGLLALHNLSQVVDLERPDLKFDPYTARFPERIREHGGNC
MAAIHQKDIIVHHPYESFDVVVQYLRQAARDPDVVAIKQTLYRTSNNSPIVKALAEAAEA
GKSVTALVELKARFDEEANIKWARDLERAGVQVVFGFIELKTHSKLSMVIRREHGQLKTY
CHIGTGNYHPITARIYEDLSFFTDDPELAEDAARVFNYITGYAEPAELNHLAVSPVNLRS
RMLEMTEAEIDHARAGRPAQIWMKMNSLVDPEVIDSLYRASQAGVQVDLVIRGICCLRPG
IEGLSENIRVKSIVGRFLEHSRIFCFGNGYGLPSPQAHVYIGSADLMPRNIDRRVEVLVP
LKTPTVHEQVLDQIMVANLKDNQQSWRILSDGGHERIEPGATEEPFNAHRYFMTNPSLSG
RGKSLKSDRPKPFVKRKKRG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgactgagactgtcgatgtgcaagacaccgttgccgcagtgccagacgtagccggtcgt
ccagttgtaaaatttggacgtgatacgacggacgatctcctgaaatcaccggcccgtttc
atgaaccgggagctgtcctggctgcagttcaacttaagggttctggaagaagccatgaac
cgcaaccacccgcttttggagcgggtgcggtttctgtcgatttccgccaacaatcttgat
gagtttttcatggtccgtgtggccgggctgcgcgggcagcagcgggccgatgttaccaac
ctgtcagatgacggcctcacgccaaccgaacagctcgacaagatcggggaagcggtccat
cagctgcaggcgtctcagcagcagatctggggagaactgcagggtgaaattgccgaagaa
ggtattgaaatccttcgcgcggagacgttggaagccgacgagcggaattggctcgaagag
tattttctctcttatatttttccggttctgacgccgctggcgattgatccggcccatccg
ttcccatttattccgaatctgggtttttctatcgtttttgaattggtgccgtcttctggc
ggggagggcatgattgctctcatgcgtgttccaagccaggttgcccgttttgttcaaatg
ccgaattccagggatggtgctgcgcgctttatcgcggtcgaaaaggtgatttcgctcttc
attggccgtttgttcccgggctacgaaatccggggcaaaggcgcgttccgggtcatccgt
gacagcgacttggaaatcgaagaagaagcggaagatctcgtgcgcctctttgaaagcgcg
ctgaagcgccgccgccggggatccgctatccgtctggaaatccaggacacaacacctccg
gccttaagagagtttgttgccgaagctttggacgtggaggatgaggaaatcttcctcgcc
aaaggtctgctggcgctccacaatctcagccaggttgttgatctggaacgtccggacctg
aagtttgacccctatacagcccgctttccggagcggatccgtgagcacggcggcaactgt
atggcagcgatccaccagaaggacatcatcgttcatcatccgtatgaatccttcgatgtg
gtggtccagtatttgcggcaagcggcgcgcgatccggatgtcgttgcgatcaaacaaacg
ctctaccgtacttccaacaactcgccgattgtcaaggcgctggcggaggcggctgaggcg
ggaaaatccgtcactgcgcttgttgaattgaaagcgcggtttgacgaagaagccaacatc
aagtgggcccgcgatctggagcgtgccggggtgcaggtggtgttcggctttatcgagctg
aaaactcactccaaattgtccatggtaatccgccgtgagcatggtcagctgaagacctac
tgccatattggcaccggcaactaccatccgatcacagcgcggatttacgaggacttgtcg
ttctttaccgacgatccggaattggctgaagatgcggcccgggtgttcaattacatcaca
ggctacgccgaaccagccgaactcaatcatctggccgtgtcgccggtcaatctgcgcagc
cgcatgctggagatgaccgaggccgaaatcgaccatgcccgagcgggccggccggcgcag
atctggatgaagatgaacagcctggtcgatccggaggtgatcgattccctctatcgggca
agccaagcgggtgttcaggttgatctggtcattcgcggcatctgttgtttgcggccaggc
attgagggcctgtcggaaaacatccgcgtgaagtcgattgtcggccggtttctggagcat
tcccgcatattctgtttcggcaatgggtatggcctgccgtcgccgcaagcgcatgtctac
attggttcggccgacttgatgccgcgcaatatcgaccggcgcgtagaggttctggtgccg
ttgaagacgccaacggttcatgagcaagtgctcgaccagatcatggtcgccaacttgaag
gacaatcagcaaagttggcggattctttctgatggcggtcatgagaggattgaaccgggc
gcaacggaagagccgttcaatgcgcaccggtatttcatgacaaacccgtcgctgtctggc
cggggcaaatcgctcaagagtgaccggccaaaaccttttgtgaagcggaaaaaaagaggt
tag
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