Labrenzia sp. VG12: CHH27_03335
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Entry
CHH27_03335 CDS
T04984
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00190
Oxidative phosphorylation
labr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CHH27_03335
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHH27_03335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
labr03019
]
CHH27_03335
Enzymes [BR:
labr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CHH27_03335
Messenger RNA biogenesis [BR:
labr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CHH27_03335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
GCFC
Motif
Other DBs
NCBI-ProteinID:
ASP36594
UniProt:
A0A222FDP0
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All DBs
Position
721263..723440
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AA seq
725 aa
AA seq
DB search
MPPDQNGQQADLTVDGGLAQSPARFMNRELSWLQFNLRVLEEAMNANHPLLERVRFLSIS
ANNLDEFFMVRVAGLRGQQRADVTNLSDDGLTPTEQLQKISEAVRDLQASQQKIWVDLRR
EIAEKGVEILHGDTLGADEKDWLQDYFLNYVFPVLTPLALDPAHPFPFIPNLGFSIVFEL
VPSSGGRGMIALLRIPNQVDRFVQLPNGADGAARFISIEKVVSLFIGRLFPGYEIRGKGA
FRVIRDSDLEIEEEAEDLVRLFESALKRRRRGSVIRLEIQDTTPPALLEFVADALDVGES
EIFLANGLLALNNLSQIVDLERSDLKFEPYSARFPERIREHGGDCLAAIHQKDIIVHHPY
ESFDVVVQYLRQAARDPDVVAIKQTLYRTSNNSPIVKALAEAAEAGKSVTALVELKARFD
EAANIKWARDLERAGVQVVFGFIELKTHSKLSMVIKREHGQLKTYCHIGTGNYHPITARI
YEDLSFFTDDPGIAEDAARVFNFITGYAQPAELNHLMVSPVNLRQRMLEMTEAEIEHARA
GRPAQIWMKMNSLVDPEIIDALYKASQAGVQIDLVIRGICCLRPGIPGLSENIRVKSIVG
RFLEHSRIFCFGNGQGLPSPEAHVYIGSADLMPRNIDRRVEVLTPLLTATVHEQVLDQIM
VANLKDNQQSWRILADGSHERIVPGANEEPFNAHQYFMTNPSLSGRGKSLKSDRPKPFLE
RQKRG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccgccagaccagaacgggcaacaggctgacctgaccgtcgacggcgggcttgcgcag
tcgccggcgcggttcatgaaccgggaactgtcctggttgcagttcaacctgcgtgttctg
gaagaggcgatgaatgccaatcatccgcttctggaacgggttcggtttctatctatttcg
gcgaacaatctggacgaatttttcatggtccgtgtcgccggtctgcgcggtcagcagcgc
gcggacgtgaccaatctctccgatgacggcctgacacccaccgaacagctgcagaaaatc
agcgaggccgtgcgtgacctgcaggcctcccagcagaagatctgggtagacctgcgccgc
gagattgccgaaaaaggtgtggagatcctgcatggagacacgctcggcgcggacgagaag
gactggctgcaggactatttcctcaactacgtcttcccggttctgacgccgctggcgctt
gatccggcacacccgttcccgttcatccccaatctgggcttttcgatcgtcttcgaactg
gtgccgagttccggcggccgcggcatgatcgcgcttctgcgcattcccaaccaggtcgac
cggttcgtgcaattgccaaatggcgcggacggcgcggcgcgtttcatttcaatcgaaaaa
gtcgtcagcctgttcattgggcgtctgtttccggggtacgagatccgcggcaagggcgcc
ttccgtgtgatccgcgacagcgatctggaaatcgaggaagaagcggaagatctcgttcgt
ctgttcgaaagtgccttgaaacgacgccggcggggatccgtgatccggctggaaatccag
gacacgacaccacccgcattgctggaatttgtagccgatgccctggatgtgggcgagagc
gagatctttctggccaacggcctgctggcgctgaacaacctgtcgcagatcgtcgacctt
gagcgctccgatctgaaattcgaaccctattcggcacggttcccggagcggatccgagaa
catgggggcgactgtctggcggcgatccaccagaaggacatcatcgttcaccatccgtat
gaatcctttgatgtggtggtgcagtatctgcgtcaggcggcccgcgacccagatgtggtt
gccatcaagcagacgctctaccgcacttccaacaattcgccgatcgtgaaggcactggcg
gaagctgccgaagcgggcaagtccgtgacggccctggtggagctgaaagcccgcttcgac
gaagccgcgaacatcaagtgggcgcgcgatctggagcgggccggtgtgcaggtggtgttc
ggcttcatcgaactgaagacgcactccaagctctccatggtgatcaagcgtgaacacggc
cagctgaagacctactgccatatcggcaccggcaactaccatccgatcacggcgcggatc
tatgaggatctgtcctttttcaccgatgatccgggcattgccgaggacgcggcccgggtg
ttcaacttcatcaccggctatgcccagcctgctgagctcaaccatctgatggtgtctccg
gtcaatctgcgccagcgcatgctggaaatgaccgaagcggagatcgaacacgcaagggca
gggcgtccggcgcagatctggatgaagatgaactccctggtcgatccggagatcatcgac
gcgctctacaaggcgagccaggctggcgtgcagatcgatcttgtcattcgcgggatctgt
tgtcttcgcccgggcattcccggcctgtcagagaacatccgggtgaagtcgattgtcggc
cggttcctggaacactcccgcatcttctgcttcggcaacgggcagggactgccgtcaccg
gaggcccatgtctatatcggctccgccgacctgatgccgcgcaacatcgaccgccgggtg
gaagtgctgacaccgctcctgacggcaaccgtgcacgaacaggtgctcgaccagatcatg
gtcgcgaatttaaaagacaatcaacaaagctggcgcatccttgccgatggcagccatgaa
cggattgtgccgggcgcaaatgaagaaccgttcaatgcgcaccagtatttcatgacgaac
ccctcattgtcgggccggggcaagtcgttgaagagtgatcgcccgaagccgttcctggaa
cggcaaaaacgaggctaa
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