Labrenzia sp. VG12: CHH27_05360
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Entry
CHH27_05360 CDS
T04984
Name
(GenBank) phytoene/squalene synthase family protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00906
Carotenoid biosynthesis
labr01100
Metabolic pathways
labr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CHH27_05360
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
labr01006
]
CHH27_05360
Enzymes [BR:
labr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
CHH27_05360
Prenyltransferases [BR:
labr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
CHH27_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
ASP36644
UniProt:
A0A222FDT8
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Position
1175322..1176173
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AA seq
283 aa
AA seq
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MTTDFDHAADIVRRFDKDRYLSALLAPETHRSGLMALYAFSAEIARIRELVSEPLPGEMR
LQWWRDLLEGTEHGAAASNPVANALLQTIDRYKLPKKGLVAMTEARVFDLYNDQMPSLND
LEGYAGETVSGVIQLACFVLNGGKDPETATAAGHAGVAYALTGLMRALPWHGSRRQMYLP
KDVCERHNLDVETVFRAETTPELGAVLSELRSHVRHHLSRVQQAAGSVPPECDNAFLPLV
LVEPFLKKLEAPRHDPLKQVIELSQLRRQWLLWRASGRALSRI
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgatttcgatcacgcagcggacattgtgcgccggttcgacaaagaccggtat
ctgagtgctttgctcgcgcccgaaacgcatcgttccggactgatggctctttatgctttc
agcgccgaaatcgcgcgcatccgggaacttgtctccgaacctttgccgggcgagatgcgc
ctgcagtggtggcgggatctcctggaaggcacggaacacggcgctgccgcgtccaatcct
gtcgccaatgccttgctccagaccatagaccgctacaagcttccgaaaaagggactggtg
gcgatgaccgaagcgcgggtgtttgatctttacaacgatcagatgccgagcctgaacgat
ctggaggggtatgccggagaaaccgtttccggcgtgatccagctggcctgctttgtcctg
aacggcggcaaggacccggaaacggccacggctgccggccatgccggcgtggcctatgca
ctgaccggtctgatgcgggcgcttccgtggcacggctccagacggcagatgtatttgccg
aaggatgtctgtgagcgtcacaaccttgatgtggagaccgtgtttcgagcggaaaccaca
cctgagctcggggcagtcctttcagagctgcgtagtcatgtccgccatcatctgagccgg
gtgcagcaagccgccggttccgttccgccggaatgcgacaatgcctttttgccgcttgtt
ctcgtggagcccttcctgaaaaagctggaagcgcctcggcatgatccgttgaaacaggtg
attgaactgtcccaactcaggcgtcaatggctgttgtggcgcgccagcggcagagcgctc
tccaggatttga
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