Labrenzia sp. VG12: CHH27_26800
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Entry
CHH27_26800 CDS
T04984
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
labr
Labrenzia sp. VG12
Pathway
labr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CHH27_26800
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
labr01007
]
CHH27_26800
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labr03016
]
CHH27_26800
Enzymes [BR:
labr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CHH27_26800
Amino acid related enzymes [BR:
labr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
CHH27_26800
Transfer RNA biogenesis [BR:
labr03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CHH27_26800
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1c
tRNA-synt_1b
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ASP37148
UniProt:
A0A222FDQ7
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Position
5799778..5801436
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AA seq
552 aa
AA seq
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MTDQSLPPLDLSQDFVEAARKSKAWPFEEARKLVKRIEKRDPGKPVLFETGYGPSGLPHI
GTFGEVLRTTMVRTAFRLLTEDKIPTRLLSFSDDMDGMRKIPENVPDRAALEPYLQMPLS
AVPNPFGGDYESFAAHNNAMLCRFLDTFGFDYEFASATEYYKAGKFDDVLIKATEKYQKI
MDVMLPTLGAERQATYSPFLPISPTSGRVLYVPMKDVNPKDGTVTFEDETGEDITLPVTG
GNVKLQWKPDFGMRWAALDVDFEMFGKDHMTNAPIYDKICNILGGKAPEHYVYELFLDDK
GEKISKSKGNGLTIDEWLTYASPESLALYNYQKPKTAKKLYFDVIPKAVDEYYTFVQKYE
QMPVEQKLQNPAWHIHSGDIPKIDMPVPFAMLLNLVSASNAENKDVLWAFISRYAPGVTA
ETHPALDALVGYAIRYFDDFVKPTKSFKTPDEIERSALEQLDAKLASLPADADGAAIQDG
VLDVARAIERYQDPNKKGPDGGPGVSVAWFSALYQLLLGQEKGPRFGSFVALYGIAETRE
MIRKALAGELAA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccaatccctgcctccgcttgacctttcgcaagactttgtcgaggcggcccgg
aaatcgaaagcctggccgttcgaagaagcgcgaaaactggtcaaacggatcgaaaagcgg
gatccgggcaaaccggttctgttcgagacgggctacggtccgtccggcctgccgcatatc
ggtaccttcggcgaggtgctgcgcacgaccatggtgcgcacggccttccgcctgctcacc
gaagacaagatcccgacgcggctcctgagcttttccgacgatatggacggcatgcgcaag
atcccggaaaatgttccggaccgggccgcgctggaaccctatctgcagatgccgctcagc
gccgtaccgaacccgttcggcggcgactacgagagctttgccgcgcataacaacgccatg
ttgtgtcgcttccttgatacgttcggcttcgactacgagttcgccagcgcaaccgaatac
tacaaggccggcaagttcgacgatgtcctgatcaaagcgacggaaaagtaccagaagatc
atggacgtgatgctgccgaccctcggcgcggagcgccaggcgacctattcgcccttcctg
ccgatctcgccgacatccggccgtgtactctatgtgccgatgaaggacgtcaacccgaag
gacggcaccgtcaccttcgaggacgagacgggtgaagacatcacgctgccggtcaccggc
ggcaatgtgaagctgcagtggaagccggatttcggcatgcgctgggcggcccttgacgtc
gatttcgagatgttcggcaaggatcacatgaccaacgcgccgatctacgacaagatctgc
aacatcctgggcggcaaggcaccggaacactacgtctatgagctgttcctggacgacaag
ggggagaagatctccaagtccaagggcaacggcctgaccatcgacgagtggctgacctat
gcctcgccggaaagtctggcgctctacaattaccagaagccgaaaacggcgaagaagctc
tatttcgacgtcatcccgaaggcggtggacgaatactacacctttgtccagaaatacgag
cagatgccggtggagcagaagctgcagaacccggcctggcatatccattcgggtgacatc
ccgaagatcgacatgccggtaccgtttgccatgctgctcaacctggtctccgcctccaac
gcggagaacaaggacgtgctctgggcgttcatctcgcgctatgcaccgggcgtaaccgct
gaaacgcacccggcgctcgatgccctggtcggttatgcgatccgctacttcgacgatttc
gtcaagccgaccaagtcgttcaagacgccggacgagatcgaacgctcggcactggaacag
ctcgatgccaagcttgcttccctgcctgcggatgcagatggtgcggccattcaggacggt
gttctggacgtcgcccgcgccatcgagcgctaccaggacccgaacaagaagggcccggat
ggtggcccgggcgtttcggtcgcctggttctcggcgctctatcagctgctgcttggtcag
gaaaagggcccgcgcttcggctccttcgtggcgctttacggcattgccgaaacccgcgag
atgatccgcaaggctctggccggcgaactggcagcctga
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