Labrenzia sp. THAF35: FIU93_28020
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Entry
FIU93_28020 CDS
T06351
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
labt
Labrenzia sp. THAF35
Pathway
labt00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIU93_28020 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
labt01007
]
FIU93_28020 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labt03016
]
FIU93_28020 (lysS)
Enzymes [BR:
labt01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FIU93_28020 (lysS)
Amino acid related enzymes [BR:
labt01007
]
Aminoacyl-tRNA synthetase
Class I (A)
FIU93_28020 (lysS)
Transfer RNA biogenesis [BR:
labt03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FIU93_28020 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1c
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
QFT70664
UniProt:
A0A9X7RIY1
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All DBs
Position
complement(6031643..6033301)
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AA seq
552 aa
AA seq
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MTDQSLPPLDLSQEFVEAATKSKAWPFEEARKLVKRIEKRGTDKPVLFETGYGPSGLPHI
GTFGEVLRTTMVRTAFRLLTEDKIPTRLLCFSDDMDGMRKIPENVPDRTALEPYLQMPLT
AVPNPFGGDYESFAEHNNAMLRRFLDTFGFDYEFASATEYYKAGKFDDVLIRATEKYQKI
MDVMLPTLGAERQATYSPFLPISPTSGRVLYVPMKDVNSKDGTITFADETGEDITLPVTG
GKVKLQWKPDFGMRWAALDVDFEMFGKDHMTNAPIYDKICNILGGTAPEHFVYELFLDEK
GEKISKSKGNGLTIDEWLTYAAPESLALYNFQKPKTAKKLYFDVIPKAVDEYYTFVQKYE
QMPVEQKLQNPVWHIHSGNIPKIDMPVPFAMLLNLVSASNAENKDVLWAFISRYAPGVTA
STHPELDALVGYAIRYFDDFVKPTKSFKVPDDVERTALEKLDETLAALPADADGSAIQDA
VLDVARSIERYQDPSKKGPDGGPGVSVVWFSALYQLLLGQEKGPRFGSFVALYGIAETRE
MIRKALAGELTA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcaatccctgcctccgcttgacctttcgcaagagtttgtcgaggcggccacg
aaatcgaaagcgtggccgttcgaagaagcgcgaaaactggtcaaacggatcgagaaacgg
ggaacggacaaaccggttctgttcgaaacgggctatggcccgtccggcctgccgcacatc
ggcaccttcggcgaagttctgcgcaccacaatggtgcgcacggcgtttcggctgctgacc
gaagacaagatcccgacgcggttgctgtgcttctccgacgacatggacggcatgcgcaag
atcccggaaaacgtgccggaccgcacagcgcttgagccatatctgcagatgcctctgacg
gcggtgccgaaccccttcggcggcgactatgaaagctttgccgagcacaacaacgccatg
ctgcgccggttcctggataccttcggtttcgattatgaattcgccagcgcgaccgaatac
tacaaggccggcaagttcgatgacgtgctgatccgggcgaccgagaagtaccagaagatc
atggacgtgatgctgccgacgctcggcgcggaacgtcaggcgacctattcgcccttcctg
ccgatctcgccgacgtccggccgcgtgctctatgtgcccatgaaggacgtcaattcgaag
gacggcaccatcacctttgcggacgagacgggcgaggacatcacgctgccggtcaccggc
ggcaaggtgaagctgcagtggaagcccgacttcggcatgcgctgggctgcgcttgacgtc
gatttcgagatgttcggcaaagatcatatgaccaatgcgccgatctacgacaagatctgc
aacatcctgggcgggaccgctccggaacacttcgtctacgaactgttcctggacgaaaag
ggcgagaagatctccaagtccaagggtaacggtctgaccattgacgagtggttgacctac
gctgcaccggagagccttgcgctctacaatttccagaagccgaagacggccaagaagctc
tatttcgacgtcattccgaaggcggtcgacgaatattataccttcgtccagaagtacgaa
cagatgccggtcgagcagaagcttcagaacccggtctggcacatccattcgggcaacatt
ccgaagatcgacatgccggtgcccttcgccatgctgctgaaccttgtgtccgcctccaac
gcggaaaacaaggacgtgctgtgggcattcatctcccgctacgctccgggcgtgacggcg
tcgacccatccggaactggatgcgcttgtcggctatgcgatccgctacttcgacgatttc
gtcaaaccgaccaagtcgttcaaggtgccggacgatgtcgagcgcactgcgctggaaaaa
ctggacgaaacgctggccgccctgccggccgatgcggatggcagtgccatccaggatgcg
gtgctggacgtcgcccggtccatcgagcgttatcaggacccgtccaaaaagggtcccgat
ggtgggcctggcgtgtccgtcgtctggttctctgcgctttaccagcttctgctcgggcag
gaaaagggaccgcgcttcgggtctttcgttgctctttacggcattgccgaaacgcgtgag
atgatccgcaaggcactggctggcgaactgacagcctga
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