Lachnoclostridium sp. YL32: A4V08_08365
Help
Entry
A4V08_08365 CDS
T04430
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy00900
Terpenoid backbone biosynthesis
lacy01100
Metabolic pathways
lacy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
A4V08_08365
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lacy01006
]
A4V08_08365
Enzymes [BR:
lacy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
A4V08_08365
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
A4V08_08365
2.5.1.29 geranylgeranyl diphosphate synthase
A4V08_08365
Prenyltransferases [BR:
lacy01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
A4V08_08365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
A-ATP_synth_H_N
Motif
Other DBs
NCBI-ProteinID:
ANU45820
LinkDB
All DBs
Position
complement(1892388..1893299)
Genome browser
AA seq
303 aa
AA seq
DB search
MSDKETFKQELDARTAEIEQLIGTYLPEETGHQKTIFEAMNYSMKAGGKRLRPMLMQEMC
RLFTGTLLEAVIPFMAAVEMIHTSSLVHDDLPCMDDDMMRRGKASTWAEYGEDIGVLTGD
ALMMFAFETAANAFETSIDPDELSRIGRAMGILAHKTGVYGMIGGQTVDVELAGGPIPGD
KLDFIYRLKTGALIEASMLIGAVLGGAAEEDCKIVESLASKIGMAFQIQDDILDVTGSQD
VTGKPSGSDEKNKKTTYVTLEGLEKAKKDVEQISTEAIEELNKLPGNNEFLEHLIRALVG
RQK
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaggaaacatttaaacaggaacttgatgcgcgtacagcagagattgagcag
ttaattggaacttatcttccggaggaaacaggccatcaaaagacaatcttcgaggcaatg
aattacagcatgaaggcaggcggaaagcgcctgcgccccatgctcatgcaggagatgtgc
cggcttttcacaggcacccttctggaagccgtgattccctttatggcggcagtggagatg
atacacacatcttctctggtgcacgacgatcttccctgcatggacgatgacatgatgcgc
aggggtaaggccagcacatgggctgagtacggcgaggacatcggtgtgcttaccggggat
gcccttatgatgttcgcctttgagactgccgccaatgcctttgagacaagcattgacccg
gacgaattgtctaggattgggcgggctatggggattcttgcccataagaccggcgtgtac
ggcatgataggaggccagaccgtggatgtggagctggccggaggtcctataccgggggac
aagctggattttatctaccgtctgaagacaggagcgctgattgaggcttccatgctgatt
ggcgctgttctgggcggcgccgctgaggaggactgcaaaattgtggagtcccttgcatcc
aaaatcggcatggcattccagattcaggacgatatcctggatgtgacgggaagccaggat
gtgaccggtaaaccttcaggaagcgatgaaaagaataagaagacgacctatgtgaccctg
gaaggcctggagaaggcaaagaaggatgtggaacagatttctacagaagccattgaggag
ttaaacaagctgccgggaaacaatgaattcctggagcacttaatccgtgcgttggtgggc
cgtcagaagtaa
DBGET
integrated database retrieval system