Lachnoclostridium sp. YL32: A4V08_34700
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Entry
A4V08_34700 CDS
T04430
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lacy
Lachnoclostridium sp. YL32
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lacy03009
]
A4V08_34700
Enzymes [BR:
lacy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
A4V08_34700
Ribosome biogenesis [BR:
lacy03009
]
Prokaryotic type
ribosomal protein modification factors
A4V08_34700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ANU50754
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Position
48101..49456
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AA seq
451 aa
AA seq
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MENIKLFCVSLGCDKNLVDTEKMLGLLNGQGIIFTDDETEADVILINTCCFIGDAKEESV
NTILEMARYKEEGNLKALLVAGCLAQRYKQEILDEIPEVDAILGTTSYEEVAKVLEQVLM
GSSGIHLSCFRDLSELPQVEARRVVTTGGHYAFLKIAEGCDKRCTYCIIPYLRGPYRSVP
IEQLVAEAGQLAEAGVKELILVAQETTLYGKDLYGEKCLPRLLKELAKIPGICWIRIQYC
YPEEITDELIETIRTEEKVCNYLDIPIQHASDRILKRMGRRTNKEELMERIGKLRREIPD
IAIRTTLISGFPGETESDHEELMDFVNEMEFERLGVFAYSAEEDTPAFSYPDQVPEEVKE
ERRDEIMELQQDIAFEHCESMVGRVLTVLIEGKVVDEPAYVGRTYMDAPNVDGLIFVNGD
VELMSGDFVRVKVTGAAEYDLIGEVYDESAQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagaatataaagctattttgcgtatccctgggatgtgacaagaatctggtggataca
gagaagatgctgggactgttaaacggacagggcatcatttttacggacgacgagacagag
gcagatgtaatactgatcaacacctgctgttttatcggggatgccaaggaggagagcgtc
aacaccatcctggaaatggcccggtataaggaggaggggaacttaaaggcccttctggtg
gctggatgtctggcccagagatataagcaggaaattctggatgagatacctgaggtggat
gccatccttgggaccacttcctatgaagaggtggcaaaggtgctggagcaggtgctcatg
ggaagttcaggcatccacctctcctgtttccgcgatttgagcgagcttccccaggtggaa
gccaggcgggtggtcaccaccggcggtcattacgcctttctgaaaatcgcggaaggctgt
gacaagcgatgtacttattgtatcatcccctatttaaggggcccctaccgcagcgtcccc
atagagcagctggtggcggaggccgggcagctggcggaggcaggggtgaaagagctgatt
ctggtggcgcaggaaaccactctttacggcaaggatctttatggggagaaatgtcttccg
agacttcttaaggagctggcaaagattccgggtatctgctggattcgtattcagtactgt
tatccggaggaaatcacggatgagctcatagagaccatccggacagaggaaaaggtgtgc
aactacctggatatacccatccagcatgccagtgaccggatccttaagcgtatgggacgc
aggaccaacaaggaagaactgatggagcgcatcggaaaactcaggcgggagattccggac
attgccatccggaccactctgatttcgggctttccgggagagactgagagtgatcatgag
gaactgatggactttgtcaatgagatggagtttgagcgtctgggagtatttgcttattcc
gctgaggaggacacaccggccttctcttatcccgaccaggtgccggaggaggtgaaggag
gagcgcagggacgagatcatggagctgcagcaggacatcgcgtttgaacactgtgagagc
atggtaggcagggtgcttacggtcctcatagaaggaaaggtggtggacgagccggcctat
gtgggacggacttacatggacgcgccgaatgtggacggtctgatatttgtgaacggggat
gtggaactgatgtcaggcgactttgtgagggtcaaggtaacaggagccgctgaatatgat
ttgataggagaggtgtatgatgaatctgcccaataa
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