Lingula anatina: 106172743
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Entry
106172743 CDS
T04921
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lak
Lingula anatina
Pathway
lak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106172743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lak03021
]
106172743
Enzymes [BR:
lak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106172743
Transcription machinery [BR:
lak03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
106172743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
106172743
NCBI-ProteinID:
XP_023932400
UniProt:
A0A2R2MQ79
LinkDB
All DBs
Position
Unknown
AA seq
1752 aa
AA seq
DB search
MEPKDFSPFLTHGITFGTYTDDEILGLSVKELTNPQSFDSLQHPTSGGLYDPALGPQDRD
DQCETCGQMSQWCPGHMGHISLPLPVYNPVFFKNLFQILKGTCFSCNRLLARGAQCSLIT
HQLTALDHGLLHIVGEMQDLYSNVLNEQGTDIGMEDTIQRQLEECLQSALGVNIENGNSY
QVKHITEMKQQLIKQFLKDHLIPKGKICGHCKMPVKPMRSEHNTKIFFQKGLDRKSAREM
IEKKNRQKQQRKQALQEGNSEYLEDEVVEMEDEKNEPSEDLNEKEVSAISEQLYLTPMEA
RSHIRKVWSNDKAVFMKLFGALIMKNSHKYPTDIFFLDVVPVAPNRFRPMAVMKERKYEH
PQSGNLCKVLLDAITIRQILADIQRSEKEGADITRSEEETTLLESVPGKSLTEKLQNVWV
RMQTHVNCVVDSELDKMSTDKHPGIKQLLEKKEGLFRKHMMGKRVNYAARSVISPDPYIN
TDEIGIPMVFALKLTYPQPVTPWNVQELRQAVINGPRQHPGAVFVENEDGTRIMLNPTDV
RQREAIAKELLTPSTFYHGPPESKKVLRHLKNGDVLLLNRQPTLHRPSIQAHKARVLPAE
KTLRLHYANCKAYNADFDGDEMNAHFVQDEIARAEAYTIASTNFQYLVPKDGTPLAGLIQ
DHMVSGVMLTMRGRFFSRGDYQQLVYAALTDKYGPVKMLRPGMIKPVKLWSGKQVLSTVL
LNLIPEGKPALNLHGKAKIAGKNWLAGQPRAWLAGGQALKDESMSESEVVIRSGELLCGV
LDKGHYGPTPYGLVHCCYELYGGVVACKLLTSLAKLFTTFLQQHGFTLGPEDILVTPQAD
VKRKKNVDASRLCGDEAAAKAMGVDSPDDTKTLLQKLEKAHYNRDGRHMMELDLAMKQKT
DEYQNNIAKVCIPHGLQKIFPNNNLQLMVQSGAKGSSVNCMQISCLLGQIELEGRRPPLM
LSGRSLPSFLPYDTSPRAGGFVDGRFLTGIRPQEYFYHCMAGREGLIDTAVKTSRSGYLQ
RCIIKHLEGIMVNYDMSVRDSDGSVVQFQYGEDSLDILKTPFLNKKQFPFLISNQNVVLN
ETELKRTESIVDTTTAGTLHRKLKKWHKKNPSSSKTRTSGFLSYSQKVWGSITEQHPDTE
LGSHGRSKATEAVCAAWRQLEEKKKRKLEKRHSCCPDPVAADLSPARYFGSLSERMLETM
DEYIKTNPDNLLVDDTETPVTPGHISTDRFKTMLFSRTMNCLAEPGEAVGLLAAQSIGEP
STQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPNMDIPILNTEYAKKKAKPLQ
LKLNKVVLAQVLEDVKVCEYLAVKNKVDKSRMYRLTFKFLPYETYKKDFCVTPNKVLSYM
EKKFIRHLCDAVKKRILELSKAKMVSTATVVERKRPQTENEPVNNTANEEDDLASDDDLN
DGDAAAVKERERQMQERDYQGEEEEKEEVGEEEEESDEDLEDEDWSIDGSSIGQSESDMS
RPVTPEPGLASSKVSKKKSKKKKRKVEMDEIRVNAVLCSHQWVHSYTYDADSEEKCQVTL
KLALSDTRFDMASLIESEARRAVVHQVQGITRAILGEVKTPGQEGTHLRTEGVNIVEMYQ
YDRVLDLDRLYTNDIHAIAETYGIEAAARAILKECRDVFAAYGIQVDYRHLSLIADYMTF
EGSYKPFNRMGIESNSSPLQKMSFETTMHFLKQTTISGSKDDLKSPSARLVVGRVVDVGT
GSFGLRQPLIVS
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaaagacttctctcccttcctaacacatggtatcacgtttggcacctacact
gatgacgagattttaggtctgagtgtgaaggagttgaccaacccccagtcatttgattcc
ctgcaacaccctaccagtggcggactgtacgatccagctctcggtccacaagacagagat
gaccagtgtgagacctgtggtcagatgagccagtggtgtccaggccacatgggacatata
tccttgccattacctgtgtataaccctgtgttctttaagaacctattccagattctgaaa
ggcacatgcttttcttgtaacagattgcttgccaggggtgcccaatgttctcttatcacc
caccagctgactgctttagatcatgggttactgcacattgtaggggagatgcaggacttg
tattctaatgtactgaatgaacagggaacagatataggcatggaggatacgatacagaga
cagctggaagagtgcctccagtcggcactcggagtgaacatagaaaatggtaactcctat
caagtgaaacacatcactgaaatgaagcagcaactaatcaaacaatttctcaaggaccac
cttataccaaaaggcaaaatatgtggacactgcaagatgccagtgaagcctatgcgatca
gaacacaacacaaaaatctttttccagaaaggactagatagaaaaagtgccagggaaatg
attgagaagaaaaacagacagaaacagcaaagaaagcaagccctgcaggagggtaattct
gaatacttggaagatgaagtagtcgaaatggaagatgaaaagaatgagccttcagaagat
ttaaatgaaaaggaagtgtctgcaatcagcgaacagctgtacttgacacctatggaggca
cgcagtcacatacgaaaagtgtggagtaatgataaggcagttttcatgaaactgtttggg
gctttaattatgaaaaactcacacaaatacccaacagatatcttcttcttggatgttgtg
cctgtagcaccaaacagatttaggccgatggctgtgatgaaagagagaaaatatgaacat
ccccagtcagggaatctttgtaaagttctcctagatgccattactatacgtcagatattg
gcagatattcagaggtcagagaaagaaggtgctgatataacacgctctgaagaagaaacg
actcttcttgaaagtgttcctgggaaaagtctgacagaaaagctacagaatgtctgggtc
aggatgcaaacccacgtgaactgtgtagtggacagtgaattagataaaatgtccactgat
aaacacccaggaataaaacagttacttgagaagaaggagggtctgtttaggaagcacatg
atggggaagagggtgaactatgctgctagatccgtcatctcaccagacccttatattaac
accgatgagatagggataccgatggtgtttgctcttaaactgacctatcctcagccggtc
actccttggaatgtccaagagctgaggcaagctgtcatcaatggaccaaggcaacatcct
ggtgctgtatttgttgagaatgaagatggcaccaggatcatgttgaaccccacagatgtc
agacagagggaagccatagccaaagaactgctgacaccaagcacattttatcatggaccc
ccagagagcaagaaggtgctacggcatttaaagaatggagatgttctgttgttaaacagg
cagccaactcttcatagaccaagtatacaggcacacaaggcccgtgtgttgccagcggag
aaaacattacgtcttcattatgccaactgtaaggcctacaatgctgactttgatggagat
gaaatgaatgctcactttgtccaagatgagatagccagggctgaggcttacacaatagcc
agcaccaacttccagtacttggtccccaaagacgggacaccacttgctggcctgattcaa
gatcacatggtctctggtgtgatgcttactatgagagggcggttctttagcagaggggac
taccagcagcttgtatatgccgcacttacagataaatatggaccagtgaagatgctgaga
ccagggatgataaagccagtgaaattgtggtcaggaaaacaagtcctctctactgtgctg
ctgaacctgattcctgaaggcaaaccagctttgaacctgcatggcaaagcaaagatagcc
ggcaagaactggttagctggtcagccaagggcatggttggccggaggacaagccctgaag
gatgagtccatgagtgaatctgaggtggtcatccggtcaggagaactgctgtgtggggta
ctggacaaggggcactatggacccacaccatatggtttagtgcactgttgctatgagcta
tatggaggagtagtggcctgcaaactgttgacaagtttagccaaactctttacaaccttt
cttcagcaacatgggttcactttaggccctgaggatattttggtgaccccacaggctgac
gtgaagagaaagaagaatgtggatgcctctcggctgtgtggggatgaggcagcagccaaa
gccatgggtgtagattccccagacgacactaaaaccctgctgcagaagttagagaaagca
cattacaacagagatggccgccacatgatggagctagacctggccatgaagcagaaaaca
gatgaatatcagaataacatagcaaaagtttgtataccacatgggctacagaaaatattt
ccaaataataatttacagttaatggtccagtctggtgctaaagggtcatcagtgaactgt
atgcagatctcctgccttctaggtcagatagaactggaaggtcgtcgaccccctctcatg
ctcagtggaaggtcattgccctcttttcttccctatgacacatcccccagggcgggaggg
tttgtggacggcaggtttcttacagggatcagacctcaggaatatttctatcattgtatg
gcaggcagagagggtttgatagacacagctgtgaagaccagcagaagtggctacttacag
agatgtatcatcaaacatctggagggtattatggtcaactatgatatgtcagtgagggac
agtgacggcagcgtggtccagtttcaatatggtgaagacagcttggacattctgaaaaca
ccattcttaaacaagaaacagtttcccttcctaataagcaaccagaatgttgtccttaat
gagacagagttgaagagaacagaaagcattgtggacactaccacagctggaacactgcac
agaaagctcaaaaagtggcacaaaaagaaccccagttcatccaagacaaggacatctgga
ttccttagctacagtcagaaggtgtggggttctatcactgagcagcacccagacactgag
ctgggaagtcatgggagaagtaaagccactgaggctgtatgtgcagcatggaggcagctt
gaggagaaaaagaaaagaaagttagagaaacgccactcttgctgcccagaccctgtggca
gctgaccttagccctgcacgatattttggatctctttctgaaaggatgcttgaaacaatg
gatgaatatatcaagacaaatcctgataatttgttggtagatgacactgagactccggtc
actcctgggcacatctctactgaccggttcaagacaatgctcttctcaagaactatgaac
tgtctagctgagccgggggaagctgtagggttacttgctgctcagtctattggagagcct
tccacacagatgacactgaatacttttcactttgctgggcgtggtgaaatgaacgtaact
ctgggtattcctcgactgcgtgaaatcctcatggttgctagtgccaatataaagacccca
aacatggacatccccatcctcaacactgaatatgctaaaaagaaagccaaaccactgcag
ctcaagttgaacaaggttgttttggctcaggtgcttgaagatgtaaaagtgtgtgaatat
ttggctgtgaaaaataaggtagataaaagcaggatgtacaggctgacttttaagtttcta
ccatatgaaacctacaaaaaggacttctgtgtcaccccgaacaaggtgctgtcttacatg
gaaaagaaattcatcagacatctgtgtgatgctgtgaaaaagagaatcttggaactgtca
aaggcaaaaatggtaagtactgccacagtagtagagagaaaaagacctcagacagaaaat
gagcctgttaacaacactgccaatgaggaggatgatctggcatctgatgatgacttgaat
gatggggatgctgctgcagtgaaggaaagggagagacagatgcaggagagagattatcag
ggagaagaggaggagaaggaagaggttggggaagaggaggaagaatcagatgaagacctt
gaagatgaagactggtctatagatggcagtagtatcggtcagtcagagtcagacatgtcc
aggccggtgactccagaacctggacttgcctcttccaaagtatcaaagaaaaagagtaaa
aagaagaaaaggaaagtggaaatggatgaaatcagagtgaatgctgtgttatgcagtcac
cagtgggtacacagttatacctatgatgcagacagtgaagagaagtgtcaggtcacactc
aagcttgccctctcagacaccaggtttgacatggcctctctgatagagagtgaggccagg
cgagcagtggttcaccaggttcaggggatcaccagggcaatcctgggggaggtgaaaaca
ccagggcaagaaggaacacacctcaggacagagggggttaatattgtggaaatgtaccag
tatgaccgtgtccttgaccttgacagactgtacaccaatgatatccatgctatagcagag
acgtatggtatagaagctgcagccagggctattttaaaggaatgcagagatgtgtttgct
gcctatggcattcaggtagactatcgacacctctcccttatagcagactatatgaccttt
gaaggaagttataagcctttcaatagaatgggaattgaatccaactcctcgccattgcag
aaaatgagcttcgaaaccaccatgcattttctcaaacaaaccaccatctcaggttccaag
gatgatttgaagtctccgtctgcccgtctggtagtaggcagagtggtggatgtgggtaca
ggaagctttggactgagacaaccactcatagtatcataa
DBGET
integrated database retrieval system