Lupinus angustifolius (narrow-leaved blue lupine): 109330037
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Entry
109330037 CDS
T04664
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109330037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lang03400
]
109330037
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109330037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DNA-PKcs_N
Motif
Other DBs
NCBI-GeneID:
109330037
NCBI-ProteinID:
XP_019419556
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All DBs
Position
LG16:11997674..12005859
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AA seq
1086 aa
AA seq
DB search
MGRSGCNGSGGSPLINPQHQITSSSSSSAFHTKPCKKSYNNNKRKTSDKELEPPSKKSTN
NDVDNEKNGPSKLSILLHNVETSDDDAAAATSQRFAVRQAHKFRFLTQDCKDAEGNLPHD
ENYDSRTLYLPLHFLKSLSGGQKQWWEFKSKHMDKVVFFKVGKFYELFEMDAHVGVKELD
LQYMKGEQPHCGFPEKNFLMNVEKLARKGYRVLVVEQTETPEQMELRRKVKGSKDKVVRR
EICAVVTKGTLTDGELLSANPEAPFLMALTECHKDHPNANSKRIYGICLVDVTTSRVILG
QFKDDLECSALSCILSEIRPVEIIKPAKLLSAETERVLLKHTRNPLVNELVPIVEFWDAD
ITVDQLKKFYRHTNDVRTEEDSLDCLPDVLQALVEAGDESRSALSALGGALYYLKQAFLD
ETLLRFAQFELLPSSGFCGLDPKPSYMILDAAALDNLEVFENNQDGGSSGTLYGQLNQCV
TASGKRLLKTWLARPLCHVRSIKKRQHAVAGLKGVNLPYALEFQKALSKLPDMERLLARI
FSASEASGRNANRVILYEDAAKKQLQEFTSALCGCEMMVHACSSLGMILNHVKSSQLRHL
LTAGEGLPDVRMDLNHFKEAFDWVEANNSGRIIPHEGVDLVYDSVCEAVKEIQSSLFKHL
KEQKKLLGDTSITYVTVGKEAYLLEVPENSCGNIPRDYDLRSSRKGFFRYWTPDIKKFLR
ELSQAEAEKECLLKSTLQRLMRRFCEHHTKWRQLVSVTAELDVLISLAIAGDCYEGPTCR
PRFLGTLSSKDAPYVYAKSLGHPVLRSDSLGKGSFVPNDITLGGQDHASFILLTGPNMGG
KSTLLRQVCLAVILAQVGADVPAESMKLSPVDRIFVQMGAKDNIMAGQSTFLTELLETAT
MLSSATHNSLVALDELGRGTSTSDGQAIAEAVLEYLVRKVQCLGLFSTHYHRLAIVYHQD
PKVSLCHMACQVGDRNAGVDVVTFLYRLTPGACPKSYGINVARLAGLPISVLKKAAAKSR
EFEAMYGKCRMVSSEANSSEQNLFDEMTAIVRQLSDVVKDLNCPDTIFCSTLIELQGKAR
EFLQRL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggtctggttgcaatggcagtggtggatcaccacttatcaatccacaacatcag
atcacttcatcctcctcctcctccgcttttcacaccaaaccctgcaaaaagagttacaat
aataataagagaaaaacaagtgacaaggaattggagcctccttccaaaaagagcaccaac
aatgacgttgataatgaaaagaatggaccttccaagctttcaatattacttcacaacgtt
gaaacttctgatgatgatgccgccgctgccacctctcaaaggtttgcggttcgtcaagct
cacaaatttcgcttcctcactcaagattgcaaagacgctgaaggaaatcttccacatgat
gaaaattacgattcaagaactctctatctgcctcttcatttcttgaagagtttgtcaggt
ggccagaaacaatggtgggaattcaagtcaaagcatatggacaaagttgtgtttttcaag
gtaggtaaattttatgaactttttgagatggatgcacatgtaggagtcaaagagctagac
ttgcagtatatgaagggagaacaacctcattgtggatttccggagaagaatttcttaatg
aatgtggagaaactggctcggaagggttatcgagttcttgtggttgagcaaactgaaaca
cctgaacagatggagctacgccggaaggtgaagggctctaaagataaggttgtcagacgt
gaaatatgtgcagtggttacaaaaggtacattgactgatggggagttgctgtcagcaaac
ccagaagcgccatttttaatggcactgaccgagtgccacaaagaccatccaaatgcaaat
tcaaagcgtatttatggcatttgtttagttgatgttaccacaagcagagtcattcttgga
cagtttaaggatgacctggagtgtagtgccttgtcatgtatcttgtctgagatcaggcca
gttgaaatcatcaaacctgctaaactgctcagtgctgaaacagagagagtactgctgaag
cataccagaaatcctttagtgaatgaattggttccaattgtagaattctgggatgctgac
ataactgttgatcaattgaagaaattttacaggcacactaacgatgttaggactgaagag
gattcattagattgcctgccagatgttttgcaggcactggtggaagcaggcgatgaaagt
agaagtgcactttcagcattaggcggtgctctctattatctgaaacaggctttcctagat
gagacattacttagatttgcgcagtttgagttacttccatcttctggtttttgcggtctt
gatccaaaaccatcatacatgattcttgatgcagctgccctggataatcttgaggttttt
gagaataaccaggatggaggttcttcaggcacactctatggccaattaaatcaatgtgtt
actgcatctggaaagagattgctaaagacatggcttgcaagaccattatgtcatgtaagg
tcaattaagaaacgccagcatgccgtggcaggtttaaagggagttaatctaccatatgcg
ctagaatttcaaaaagcattatcaaagctacctgacatggagcggttgcttgcacgcatc
ttctctgctagtgaagctagtggaaggaatgctaatagagtgattttatatgaggatgca
gcaaaaaaacaactgcaagaatttacttcagctctgtgtggttgtgagatgatggtacat
gcatgctcttcacttggtatgattttgaatcatgtcaaatctagtcaacttcgtcatctg
ttaacagctggtgaaggccttcctgatgtccggatggatctaaatcatttcaaggaggct
tttgattgggtggaagctaataactctgggcgtataatacctcatgaaggagttgactta
gtgtatgactcagtctgtgaggcagttaaagagattcaatccagtttgttcaagcatctc
aaggagcaaaaaaaactacttggagatacatcaatcacctacgtcactgttgggaaggag
gcatacctattggaagtgccagaaaattcgtgtggaaatattcctcgggattatgacttg
cgttcatccagaaaaggcttctttaggtactggaccccagatattaaaaagttcttgagg
gagctttcccaagctgaagctgaaaaggagtgcttattgaaaagtacattacaaaggtta
atgaggcgcttttgtgaacatcacactaagtggaggcagttggtgtctgtaactgctgag
ctagatgttttgatcagtttagctattgctggtgattgctatgaaggaccaacatgcaga
ccacgtttcttaggtacattaagttcaaaagatgctccttatgtctatgctaaaagtttg
ggacacccagtccttagaagtgattccttaggcaagggttcttttgtacccaatgacata
acccttggaggtcaagatcatgctagctttatccttctaactggccctaacatgggtgga
aagtcaactcttcttcgccaagtttgcttagctgtgattttggcccaggtaggagctgat
gttcctgcagaaagtatgaaattgtcacctgtggaccggatatttgttcaaatgggtgcc
aaagataatatcatggctggccagagtacctttttaactgagcttttagaaactgcaaca
atgctgtcatcagccactcataattcattggttgctctggatgagcttgggcgtggaacc
tcaacttctgatggacaagccattgcggaggcagtactggaatatcttgtgcggaaggtg
cagtgccttggattgttttcgacgcattatcatcgattagctatagtttatcaccaagat
cccaaggtctctctctgccatatggcatgccaagttggtgatagaaatgcaggtgtggac
gtggtcacctttctttaccggctgacccctggtgcatgccccaagagctatggtattaat
gttgcccggttagctggacttccgatttctgtgcttaagaaggctgctgccaagtccaga
gaatttgaggccatgtatggtaaatgcaggatggtgtcttctgaagcaaactcttccgaa
caaaatttgtttgatgagatgacagctatcgtacgacaattgtctgatgttgttaaagat
ttgaattgcccggataccattttctgcagtaccctaattgagcttcagggtaaagcaaga
gaattcctgcagcgactttaa
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