Lupinus angustifolius (narrow-leaved blue lupine): 109331242
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Entry
109331242 CDS
T04664
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109331242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109331242
Enzymes [BR:
lang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109331242
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109331242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Flavodoxin_5
BUD22
Motif
Other DBs
NCBI-GeneID:
109331242
NCBI-ProteinID:
XP_019421167
UniProt:
A0A4P1QSX3
LinkDB
All DBs
Position
LG17:3611017..3626150
Genome browser
AA seq
1665 aa
AA seq
DB search
MVQTTEGATNFVEAVAFSFLTHQELKRSSCVTIKNPILLDGLDRPVPEGLYDPALGPLDE
KSPCKTCGQASKHCPGHFGHIELILPAFNPLMFNILKNLLQITCFSCHRFKASRPEVDLC
TSQLELIIKGDIIRAKNLGSINPEEFVRPGDDDGSQCCSAEQMGEKWTSLQFSEAKSVLR
KFLMKKYRKCQNCKFINPKITTPTYGWFHKNVISAAHTRSNIINAQDAFMSSEAINDDIS
FENGDTTDVEDIALDGTGKSASKKHNLSHMLAKLDERSGSLLPSKVKSIFKHLWENEARL
CSYISDIQGQGVGKNTGPSMFFLENIFVPPIKFRPPTKGGDNVMEHPQTVLLTKVLESNE
SLRDAWRAYLDVSGSSKVVSSWWMELQKSVNILFDNKTSGQKEAATGICQLLEKKEGIFR
QKMMGKRVNFACRSVISPDPYLAVNEIGIPPYFALRLTYPERVTPWNVAMLRDAILNGPE
SHPGATHYADKVSIVKLPPKGKMLSLTSRKLPSSRGVILQHGKISDQEFEGKVVYRHLKD
GDIVLVNRQPTLHKPSIMAHVVRVLKGEKTVRMHYANCSTYNADFDGDEINVHFPQDEIS
RAEAYNIVNANNQYVKPTSGDPIRALIQDHIVSAALLTKKDTFLRFEEFNQLLYSSGVSM
TGMGSFCGKSGKKVFMLSTESEMLMFPPAIWKPEPLWTGKQVISALLYYITKGSPPFTVE
KNAKIPSNFFKTRINEGIRCSEDASRKKDQPDEDKLLIYRNDLVRGVVDKAQFGDYGMVH
TVQELYGSNIAGNLLSALSRLFTNFLQMHGFTCGVDDLLITEEKDGERMAQLESCEEIGD
IVHREFVGVMDDARLDPITLQLNIEKKIRSNGEAALTYLDRKMISNLNTRTSSGILKELL
SEGILKSSGKNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFTPW
DCSPRAGGFIIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKV
SYDHTVRDSDGSVIQFHYGEDGVDVHQTSFITKFEALSTNKELVYSNFCRQLDKSSPYIN
KLPDALERKAKKFIREKQRNTGSIKRSDFLKLMEHKYISSLAQPGEPVGVLASQSVGEPA
TQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAAKDIKTPFMSCPLTLIPEKSMEDANRLA
DKLKKITVADIIENMEVSVVPVAVHDGQICSIYKLEMKLYKPKHYPKYTDITIADWEETL
NFFFVRELEDAIENHMSLLSKISGIQNFKSDPQSSSTNGSEDVDSNGLESEKKGRNNDDD
DEDGGGEDAEGAEDLGSDAQKRKQQGTDEVDYEDGAEEDTHDGELSEDFEDDEGGGNVKV
NEDGGHVIVNENESDTEFSEGGENVPNDANNSHAHEIKSKPKSTDKKDNMESGKKKSEST
TKKYDRRIFVEAKGMNFKIHFKFINEPHILLAQIAQRTAKKVCIQKFGKVGECKAITCKE
SGVIYNGEDEGKKDAEKIPALQTSGIHFQTFWELQDDLDVNYVYSNNVFEMLNAYGVEAA
RETIIREVQNVFKSYGISVNIRHLTLIADFMTHSGGYRPMSRMGSIADSTSPFIKMCFET
ASKFIVEAAYHGQVDNLETPSARVCLGLPVKMGTGCHELIQKVEI
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaaccacagagggggcaacgaatttcgttgaagcggttgcgttcagtttttta
actcatcaagagttgaagaggagtagttgtgtaactataaaaaatcccattttgcttgat
ggtcttgatcgacctgtacctgagggattgtatgatcctgctttgggtccactggatgag
aaatctccttgtaaaacatgtggtcaagcctcgaaacattgccctggtcactttggtcat
attgagctcattttacctgcattcaatcctttgatgttcaatattcttaaaaatcttcta
cagataacttgtttctcttgtcatcgttttaaggctagcagacctgaggtggatttatgt
acatcccaactggagctcattataaaaggggatattatcagagcaaaaaatttgggttca
attaatccagaggaattcgtgcgtccaggtgatgatgacgggagccagtgttgtagtgct
gaacaaatgggagaaaaatggacctcccttcaatttagtgaggcaaagtctgttctaagg
aagtttctaatgaagaaatataggaagtgtcaaaattgtaaattcatcaatcctaaaatc
actacaccaacctatggatggtttcataagaatgttatttcggctgctcatacaagatca
aatatcattaatgctcaagatgcattcatgtcgagtgaagctatcaatgatgatatttct
tttgaaaacggggatactacagatgtagaggatattgccttggatgggaccggtaaaagt
gcttctaaaaagcataatttgtctcatatgctcgctaagctagacgaacgttctgggtct
ttgttaccatcaaaggttaaaagcattttcaagcatttgtgggaaaatgaggctcgactc
tgttcttatattagtgatattcaaggtcagggggttggaaagaacacaggtccgtcaatg
ttctttctggagaatatttttgttccaccaatcaaattccgccccccaaccaaaggaggt
gataatgtaatggagcatcctcaaactgtccttttgactaaggttttagagtcaaacgaa
tccttacgagatgcgtggcgtgcatatctagacgtgtcaggttcctcaaaagttgtaagc
agctggtggatggaacttcagaaatccgtcaacatcctatttgacaataaaacatctggt
caaaaagaagctgctactggaatttgtcagttgttggagaagaaggaaggcatcttccgt
cagaaaatgatgggaaagagggtcaattttgcttgccgctctgtcatatctcctgatcct
tatttagcagtgaatgaaattgggattcccccatattttgctttaagattaacttatccc
gagagagtcactccttggaatgtagccatgttaagggatgctatccttaacggtcctgaa
tcgcatccaggtgccacacactatgctgataaagtttcgatagtcaagcttcctccaaaa
gggaagatgctttctttgacatcaaggaagttaccttcctctagaggggttattttgcaa
catgggaagatatctgatcaggaattcgaaggtaaagttgtatatcgccacttgaaggat
ggtgatattgtactcgtcaatcgacagcctacacttcataaacctagtataatggcgcat
gtagttcgtgttttaaagggggagaaaacagtacggatgcactatgcaaactgtagtact
tacaatgctgattttgacggtgatgagattaatgttcattttccacaagatgaaatttcc
cgagctgaagcctacaatattgtgaatgccaacaatcagtatgtgaagcctaccagtggg
gatccaatcagagccttgattcaggatcatattgtaagtgctgctcttcttacaaaaaag
gatacttttttaagatttgaggagttcaaccaactcctctacagttctggtgtatccatg
actgggatgggctctttctgtggcaaatctgggaagaaagttttcatgttaagtactgag
agtgaaatgcttatgtttcctccagcaatatggaagccagagccactatggacaggaaaa
caggttatcagtgcgttgctatactatatcactaaaggttctccaccatttactgtggaa
aagaatgcaaaaatcccctctaattttttcaagacccgaatcaatgagggaattaggtgc
agtgaagatgcatcaagaaagaaggaccagcctgatgaggataaattgttgatatataga
aatgatttggtgcgtggtgtagttgataaggctcagtttggtgactatggtatggtacat
accgtgcaagagctttatggctcaaatattgctggcaatctgctttcagcattaagtcgt
ttattcacgaactttttacagatgcacgggttcacatgcggagtagatgatcttctgata
acagaagaaaaggatggtgaaagaatggcacaacttgaaagctgcgaggaaattggtgac
attgttcatcgtgaattcgttggagtcatggatgatgctagattagacccaatcacattg
cagttgaatattgagaaaaaaatacgcagtaatggagaagcagccttaacatacttagat
aggaagatgataagtaatcttaacaccaggacaagctcaggcatattaaaggagttacta
tctgaaggaatattgaaatcctctggaaaaaattggatttctctcatgactacatccgga
gctaagggtagtatggtcaactttcagcagatatcgtctcatctaggccagcaagaattg
gaaggaaaacgagttccacgcatggtttctggaaagaccttgccatgctttactccctgg
gattgttctcctagagcaggagggttcattatagatcgttttcttactgcccttcgccca
caggaatattactttcattgcatggctggtcgtgaaggattggttgatactgcagtcaaa
acgtctcggagtggttacctacaaagatgcctaatgaaaaatcttgagtgtcttaaagtt
agttatgatcatactgttcgtgattctgatggttcagttatccagtttcattatggagaa
gatggtgtagatgtccatcaaactagctttatcaccaagtttgaagcattgtcaactaat
aaagaattggtttatagcaacttttgtcgtcagctagacaaatccagtccttacattaac
aagttgcctgatgctcttgaaagaaaagcaaaaaaattcattcgcgagaaacagagaaat
actggttcaataaaacgatcagatttcttgaaattgatggagcacaagtatatctcgagt
cttgcacagcctggagagccagttggtgtgttagcttctcagtctgttggagaaccggca
acacagatgactttgaatacattccatcttgctggtcgtggtgaaatgaatgtgacactt
ggaattccacgtctacaagagatcctaatggctgccgcaaaagatatcaagactccattt
atgtcatgccccttgaccttgatacccgaaaagtcaatggaagatgcaaatcgtcttgca
gataagttgaagaagatcactgtagctgacataattgagaatatggaagtgtctgttgta
ccagtagctgttcatgatggtcagatttgcagtatatataagcttgagatgaagctatac
aagcctaaacactatccaaaatacactgatataacaattgcagactgggaggaaactcta
aactttttttttgtgagggagttggaggacgccatcgagaatcacatgtcattgctctct
aagattagtggcatacaaaattttaagtcagatccacaatcaagttctacaaatgggtca
gaagacgttgacagcaatggattggaatctgagaaaaagggtcgcaataatgatgatgac
gatgaagatggtggtggtgaagatgcagaaggggctgaggatcttggttcagatgcacaa
aagcgaaaacagcaaggtactgatgaggttgattatgaggatggtgctgaagaggacaca
catgatggtgagctatcagaggatttcgaagatgacgagggtgggggtaatgtaaaagtt
aatgaggatgggggtcatgtcatagttaacgagaatgaaagtgatactgaatttagtgag
ggtggtgagaatgtgccaaatgatgccaataattctcatgcacatgaaataaaatccaag
cccaagtctactgataaaaaggataatatggaatctggaaagaaaaaatctgaatcaaca
acaaaaaaatatgacaggcgaatttttgtggaagcgaaagggatgaattttaagatccac
tttaaatttatcaatgaacctcacattttgttggctcagattgctcagagaactgctaag
aaggtttgcatccagaagtttggaaaggttggtgaatgtaaagctattacatgcaaagaa
agtggagtaatctacaatggtgaagatgaaggtaagaaggatgcagagaaaataccagca
cttcagacatcagggatacatttccaaacattttgggagttgcaagatgatcttgatgtt
aactatgtttattctaacaatgtctttgaaatgctaaatgcttatggggtggaagcagcc
agagagaccatcataagagaagtacaaaatgtgttcaagtcttatgggatttcagtaaat
atccggcatttgacgcttattgctgactttatgacacactctggtggctatcgtccaatg
agcagaatgggtagcatagcagactcaacatcccctttcatcaaaatgtgctttgaaaca
gcctccaaattcattgttgaagcagcttatcatggacaagtggacaatttggaaactcct
tcagctagagtttgtcttggtttaccagtaaaaatgggaactgggtgccatgagttgatc
cagaaggtggaaatatga
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integrated database retrieval system
