Lactobacillus apis: DKL56_03300
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Entry
DKL56_03300 CDS
T06844
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lapi
Lactobacillus apis
Pathway
lapi00730
Thiamine metabolism
lapi01100
Metabolic pathways
lapi01240
Biosynthesis of cofactors
lapi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lapi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DKL56_03300
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DKL56_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lapi03016
]
DKL56_03300
Enzymes [BR:
lapi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DKL56_03300
Transfer RNA biogenesis [BR:
lapi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DKL56_03300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
AWM73581
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Position
678882..680099
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AA seq
405 aa
AA seq
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MEYTEIMIRYGELSTKGKNRKDFIGRLAGNVTKVLRDFPQVEIHPKHDRMHIVLNGAPFK
QVDQHLKKVFGIQTYSPTIKTEKTLKDIEETALALMKKTYHEGMTFKVNTKRSDHHFTYD
TNELNLMVGDYLFDHMSNLKVEMKHPDIVLRIEVRQDAVYISDELLHGAGGMPVGTGGRA
VMMLSGGIDSPVASYLALKRGVDIEMVHFYSPPYTTEKALNKAKELTGILANYAGRINFI
AVPFAEIQETIKEKIPEGYLMTVQRRFMLRLADLIREKRKDLAIFNGESVGQVASQTLES
MAAINDVTTTPVLRPVATMDKTEIISLAEKIGTFDLSIQPFEDCCTIFAPPRPKTKPKMD
KAREYEARLDVDGLIERALDGIEVTPIYPDEKFLANKAEEDTALL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaatatacggaaattatgattcgctacggcgagctttcaaccaagggaaagaatagg
aaggacttcattggccgcttagcaggaaatgtaactaaagttctgcgtgactttccgcaa
gtcgaaattcatcccaagcatgatcgcatgcatattgttttaaatggtgcaccatttaaa
caagttgatcaacacttaaaaaaggtttttggtattcaaacctattccccaacgattaag
actgagaagactttaaaggatattgaggaaacggccttagccttaatgaagaaaacctat
catgaaggaatgacttttaaggttaatactaagcgtagcgatcaccatttcacttatgat
accaacgaattgaatttaatggttggtgactatttgtttgatcacatgtccaacctaaaa
gttgaaatgaagcatcccgacattgttttgagaattgaagttcgtcaagatgcagtttac
atttctgatgagttgctccatggtgctggcggaatgccggttggaacgggtggaagagca
gtgatgatgctttccggtggaattgactctccagttgcttcatatttggcattaaagcgt
ggtgttgacattgagatggttcatttttatagtccaccatacactactgagaaggctttg
aataaggcaaaagagctgactggaattttggcaaattatgctggtcgaattaacttcatc
gctgttccatttgctgagattcaagaaactattaaggaaaaaattcccgaaggctacttg
atgacagttcaacgtcgtttcatgctaaggcttgctgatttgattcgcgagaagcgcaag
gatttagcgatttttaacggagaatcagttggtcaggttgcctcacaaacattggaatca
atggctgcaattaatgatgtgacgactacacctgtccttcgtcctgttgcaacaatggat
aagacagaaattatcagtttagctgaaaaaattggcacttttgatttgtcaattcaaccg
tttgaagattgctgtactatttttgcaccaccacgtccaaagacaaaaccgaaaatggat
aaagcacgtgaatatgaagctagactggatgtcgatggtttaatagaacgtgcacttgat
ggtattgaagttacaccaatctatccagatgagaaattcctggctaataaagctgaggaa
gatactgcattactgtaa
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