Loxodonta africana (African savanna elephant): 100657486
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Entry
100657486 CDS
T04351
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100657486 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100657486 (CLP1)
Enzymes [BR:
lav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100657486 (CLP1)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100657486 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
TniB
AAA_16
AAA_18
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
100657486
NCBI-ProteinID:
XP_003421383
UniProt:
G3TE35
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYH
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccaatgatgacaagaagccaacaactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagctactggctggc
atggcagaaatctttggcacagagctgacccgaaacaagaaattcacctttgacgctggt
gccaaggtggctgttttcacctggcatggctgctctgtgcagctgagcggccgcactgag
gtggcttatgtctccaaggacacccctatgctgctttacctcaacactcacacagccttg
gagcagatgcggaggcaggcagagaaggaagaagagcgaggcccccgagtaatggtagtg
ggccccactgatgtgggcaagtccacagtgtgccgcctactgctcaactatgcagtgcgt
ttggggcgccgcccgacttacgtggagctggatgtgggccagggctctgtgtccatccct
ggcaccatgggggccctctacattgagcggccagcggatgttgaagagggcttctctatc
caggcccctctggtctatcattttggctccaccacacccggcaccaacatcaagctttat
aataagattacatctcgtctggcagatgtgttcaaccaaaggtgtgaggtgaacaggagg
gcctccgtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggctaccat
gccctggtgcacgcagcctcagcttttgaggtagatgtggttgtggttctggatcaagaa
cggctgtataacgaactgaaacgggacctgccccactttgtacgtactgtgctcctccct
aaatcagggggtgtggttgagcgctccaaggacttccggcgggaatgtcgggatgaacgg
atccgtgagtatttctatggattccgaggctgtttctacccccatgcattcaatgtcaag
ttttcagatgtaaaaatatacaaagtcggggcccccaccatcccagactcctgtttgcct
ctaggcatgtctcaggaggataatcaactcaagctagtacctgtcacccctggccgagat
atggtgcaccacctcctgagcgttagcactgctgagggcacagaggagaacctttcagag
acaagtgttgctggcttcatcgtggtaaccagtgtggacctagagcatcaagtgtttact
gtcctctctccagccccccgcccgctgcctaagaacttccttctcatcatggatatccga
ttcatggatcttaagtag
DBGET
integrated database retrieval system
