Loxodonta africana (African savanna elephant): 100667592
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Entry
100667592 CDS
T04351
Symbol
TPR
Name
(RefSeq) nucleoprotein TPR isoform X2
KO
K09291
nucleoprotein TPR
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03013
Nucleocytoplasmic transport
lav05014
Amyotrophic lateral sclerosis
lav05200
Pathways in cancer
lav05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100667592 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100667592 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
100667592 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100667592 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lav03019
]
100667592 (TPR)
Messenger RNA biogenesis [BR:
lav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100667592 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
DUF1192
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
100667592
NCBI-ProteinID:
XP_003410889
LinkDB
All DBs
Position
Unknown
AA seq
2436 aa
AA seq
DB search
MPSSGLVSRSRQRGRPMTARGFEGSRRGSLRRAGAREPPSEATEATAQAPGFSWSSSFSS
ASAPLAAAAPAATEMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKF
KVESEQQYFEIERRLSHSQERLVHETRECQNLRLELEKLNYQLKVLTEKNKELEVAHDRN
IAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYLTEDVKRLNEKLKDSNTTKGELQLKL
DELQASDVSVKYREKRLEQEKELLHNQNTWLNTELKTKTDELLALGREKGNEILELKCNL
ENKKEEVSRMEEHMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLS
NLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEESKDQMEKEMLEKI
GKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQ
DQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKEIQ
RLQEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADI
SSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLESS
LTELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGVVIPLQASNLDDISLVSTPKRSS
TSQAVSTPAPVPVIESTEAVEAKAALKQLQEIFENYKKEKTDNEKIQNEQLEKLQEQVTD
LRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMTQD
LRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGIL
ERSETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTETNL
HLNTKELLKNAQKEIAALKQHLGNMEVQLASQSSQRAGKGQPGDREDVDELRSQLRQTEE
QVNDLKERLRTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEK
KLMEVEKEKQELQDDKRKAIESMEQQLSELKKTLSSVQNEVQEALQRASAALSNEQQARR
DCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLLE
YKASWEERERVLKDEVSKCMSRCEDLEKQNRLLHDQIEKLSDRVVASVKEGVQGPLNVSL
SEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAER
EKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDILP
LQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTK
RIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLREDLNKVRTEKENIQKDLDAKVVDIQE
KVKTITQVKKIGRRYKTQYEELKAQQDKVLESSAQSSGDHQEQHVSVQEMQELKETLSQA
ETKSKSLESQVENLQKTLSEKEMEARNLQEQTAQLQSELSRLRQDLQDRTTQEEQLRQQI
TEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQY
EGRISRLERELREHQERHLEQRDEPQEPTNKVPEQQRQITLKTTPASGERGIASTSEPPT
ANIKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQ
EAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQI
EPANQELSPNIVEVVQSSPIERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEASDQV
SDDTVEMPVPKKLKSVTTVGPEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPM
EDSEETSQSLQIDLGPLQSDQQAASSQDGQGKGDDVIVIDSDDEEEDDDENDGEHEDYEE
DEEEDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGES
NQRAADSQNSGEGNTGTTESSFSQEISREQQPSSASERQTPRAPQSPRRPPHPLPPRLTI
HAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTD
GFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESG
GRSVPTTPLQVAAPVTVFTESATSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVF
VEAESEGISSEASLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVR
LQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7311 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggtttggtgtctagaagccgccaaagagggcgacccatgacagcccgg
ggctttgaagggtcccgccgtgggagtctccggcgggcaggcgcgcgggaacccccgagc
gaggcgacggaggcgacggcccaggctcctggcttctcctggtcttcgtctttctcctct
gcttcggccccgttggccgctgcggcccctgccgccaccgaaatggcggcggtgttgcag
caagtcttggagcgcacggaactgaacaagctgcccaagtccgtccagaacaaacttgaa
aagttccttgctgatcagcagtccgagatcgatggtttaaaggggcgacacgaaaaattc
aaggtggagagcgaacaacagtacttcgagatagagaggaggctatcccacagtcaggag
agacttgtgcacgaaacccgagagtgccagaatttgcggcttgaactagagaagctcaac
tatcaactgaaggtactaactgaaaaaaacaaagaactcgaagttgctcatgatcgcaat
attgccattcagagccagtttacaagaacaaaggaagaattagaagctgagaaaagagac
ttaattagaaccaatgagagactgtctcaagaacttgaatatctaacagaggatgttaaa
cgtctaaatgaaaaacttaaagacagcaatacaacaaagggcgaacttcagttaaaatta
gatgaacttcaagcttctgatgtttctgttaagtatcgagaaaaacgtttggagcaagaa
aaagaattactgcacaatcagaatacatggctgaatacagagttaaaaaccaaaactgat
gaacttctggctcttggcagagaaaaaggaaatgagattctagagcttaaatgtaatctt
gaaaacaaaaaagaagaggtttctaggatggaagaacacatgaatggcttgaaaacatca
aatgaacatcttcaaaagcacgtagaagatctcttgaccaaattgaaagaggctaaggaa
cagcaggccagtatggaagagaaattccacaatgaattgaatgcccacataaaactctct
aacctatacaagagtgctgctgatgactcagaagcaaagagcaatgaactcactcgggca
gtggatgaactacacaaacttttaaaagaagctggggaagctaacaaagcgatacaagat
catctcctggaggtggaagaatctaaagatcaaatggaaaaagaaatgcttgagaaaata
gggaaattggagaaggaactggagaatgcaaatgacctgctttctgccacaaaacgtaaa
ggagccattttatctgaagaagaacttgcagccatgtctcctactgcagcagctgtagct
aagatagtgaaacctggtatgaaattaactgagctgtataatgcttatgtggaaacacag
gatcagttgcttttggagaaactagagaacaaaagaattaataagtatctagatgaaata
gtgaaagaagttgaagccaaagcaccgattttgaaacgccagcgtgaagagtatgaacgt
gcacagaaagcagtggcaagtttatctgttaaacttgaacaagctatgaaggagattcag
cgattgcaggaggacactgataaggcaaacaaacattcttctgtacttgaaagagacaat
caaagaatggaaatacaaataaaagacctttcacaacagattagagtgcttttgatggaa
cttgaagaagcaaggggtaatcatgtaattcgtgatgaggaagtaagctctgctgatata
agtagttcttctgaagtaatatcacagcatctagtatcttacagaaatattgaagaactt
caacagcaaaatcaacgtcttttagtggctcttagggaacttggggaaactagagaaaga
gaggaacaagaaacaacttcatccaaaatcactgagcttcagctcaaacttgagagctcc
cttactgaattggaacaactccgtgagtcacgacaacatcagatgcagcttgttgattcc
atagttcgtcagcgtgatatgtaccgtattttgttgtcacaaacaacaggagttgtcatt
ccattacaagcttcaaacttagatgatatttctcttgtgtcaactccaaaacgttcaagt
acatcacaggctgtttccactcctgctccagtacctgttattgagtcaacagaggctgta
gaagcgaaggctgcccttaaacagttacaggaaatttttgagaactacaaaaaagaaaag
acagataatgaaaagatacaaaatgagcagctcgagaagcttcaagagcaagttacagat
ttgagatcacagaacaccaaaatttctacccagctagattttgcttctaaacgatacgaa
atgctacaagataatgttgaaggatatcgccgagaaataacatccctacatgagagaaat
cagaaactcactgcaacaacacagaaacaggaacagatcatcaacactatgactcaggat
ttgaggggagcaaatgaaaagctagctgttgcagaagtaagagcagaaaatttgaagaag
gaaaaagaaatgctaaaattgtcagaagtccgtctttctcagcagagagagtctttgtta
gctgaacaaagagggcaaaacttgctgctaactaatctgcaaacaattcagggaatacta
gagcgatctgaaacagaaaccaaacaaaggcttagtagccagatagaaaaactggaacat
gagatatctcatctaaagaagaagttggaaaatgaggtggagcaaaggcatacgcttact
agaaatctagatgttcaacttttggatacaaagcgacagctggatactgagacaaatctt
catcttaatacaaaagaactactaaaaaatgctcaaaaggaaattgctgccttgaaacag
caccttggcaatatggaagtccaacttgcttctcagtcctcgcagagagctgggaaaggt
cagcctggtgacagagaagatgtagatgagcttcggagtcagctaaggcaaacagaagag
caggtgaatgatttgaaggagagactcagaacaagtactagtaatgtggaacagtatcga
gcaatggttacgagtttagaagaatccctcaacaaggaaaaacaggtgacagaggaagta
cgtaagaatattgaagttcgtttgaaagagtctgctgagtttcagacacagttggaaaag
aagttgatggaagtagagaaggaaaaacaagaacttcaagatgacaagagaaaagccata
gagagcatggaacaacagttatctgagctaaagaaaacactttctagtgttcagaatgaa
gtacaagaagctcttcagagagcaagtgcagctttgagtaatgaacagcaagccagacgt
gactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgaaagagaattg
atgctacatgccgctgatgttgaagctctacaagctgccaaggagcaggtttcaaaaatg
gcatcagtccggcagcatttggaagaaacaacccagaaagcagaatcacagttgttggaa
tataaagcgtcttgggaggagagagagagagtgttaaaggatgaagtttccaagtgtatg
tctcgctgtgaagatctggagaaacagaacagattgcttcacgatcagattgaaaagtta
agtgacagggtagttgcctctgtgaaggaaggtgtacaaggaccgttgaatgtgtctctc
agtgaagaaggaaaatcccaagaacagattttagaaattctcagatttatacgacgagaa
aaagaaattgctgaaactaggtttgaggtggctcaggttgagagtttgcgttatcgacaa
agggttgaacttttagaaagagagctccaggaactgcaagatagtctaaatgctgaaagg
gagaaagtacaggtcactgcaaaaacaatggcccagcatgaagaactgatgaagaaaact
gaaacaatgaatgtagttatggagaccaataagatgctaagagaagaaaaggaaaggcta
gaacaggatctacagcagatgcaagcaaaggtgagaaaactggagttagatattttaccc
ttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaggcagagaagaag
ttattagaagaggatgtcaaacgctggaaagcacgtaaccagcatctagtaagccagcag
aaggatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcataccaag
cgtattcaacagttgactgaagaaattggaagacttaaagctgaaattgcaagatcaaat
gcatctttgactaacaatcagaacctaatccagagtctgagggaagatttaaataaagta
agaaccgaaaaggagaacatccagaaggacttagatgccaaagtagttgacatacaagaa
aaagtcaaaacgattactcaagtcaagaaaattggacgtaggtacaagactcagtatgaa
gaacttaaagcacaacaggataaggtcctggagagctcagctcagtcttctggagaccat
caggaacagcatgtctcagtccaggaaatgcaggagctcaaagaaaccctcagccaagct
gagacaaagtcaaaatcactggagagccaagtcgagaatcttcagaagacattgtctgaa
aaagagatggaagcaaggaacctccaagaacagactgcgcagctacagtctgaactttcg
cgactccgtcaggaccttcaagatagaaccacacaggaggagcagctgagacagcagata
actgaaaaggaagagaaaacaagaaaggctattgtagcagcaaaatcaaaaattgcacac
ttagctggtgtaaaagatcagctaactaaagaaaatgaggaacttaaacaaaggaatgga
gccttagatcaacagaaagatgaattggatgtacgtatgactgctctaaaatcccagtat
gaaggtcgaattagtcgcttggaaagagaactcagggagcatcaagagagacacctcgag
caaagagatgagcctcaagaacctactaataaggttccagaacagcagagacagatcaca
ttgaaaacaactccagcctctggtgaacgaggaattgccagcacatcagaaccaccaaca
gccaatatcaagccaactcctgttgtgtctactccaagtaaagtgacagctgcagctatg
gctggaaataagtcaacacccagggctagcatccgcccaatggttacacctgccactgtt
acaaatcctactactaccccaacagctacagtcatgcccactacacaggtagaatcacaa
gaagcaatgcagtcagaagggcctgtggaacacgttccggtttttggtagcacaagtgga
tctgttcgttctactagtcctaatgtccagccttctatctctcaacctattttaactgtt
cagcagcaaacacaggctacagcttttgtgcaacctactcagcagagtcatcctcagatt
gagcctgcaaaccaagagctatccccaaacatagtagaggttgttcagagttcaccaatt
gaacggccttctacttccacagcagtgtttggcacggtttcagctaccccaagttcttct
ttgccaaagcgtacacgtgaagaggaagaagatagcaccatggaagcatcagaccaagta
tctgacgatacagtggaaatgcctgttccaaagaaattgaaaagtgttacaactgtagga
cctgaggaagaagttatggcagaagaaagtactgatggagaggtagagactcaagtatac
aaccaggattcccaagattctattggagaaggagtcacccagggagattacactcctatg
gaagacagtgaggagacctctcagtcccttcaaatagatcttgggccccttcagtcagat
cagcaggcagcgtcgtcccaggatggtcaaggcaaaggcgatgatgtcattgttattgac
agtgacgatgaggaggaggatgatgatgaaaacgatggcgagcatgaggattatgaggaa
gatgaggaagaagatgatgatgatgaagatgacacagggatgggagacgagggtgaagat
agtaatgaaggcactggtagtgcagatggcaatgatggatatgaagctgatgatgctgag
ggtggtgatgggactgaccctggtacagaaacagaagaaagtatgggtggaggcgaaagt
aatcagagagctgctgattctcaaaacagtggtgaaggaaatacaggtactacagagtcg
tctttttcccaggagatttctagagaacagcagccatcatcagcatctgaaagacagacc
cctcgagcacctcagtcaccaagacgcccaccacatccgcttcctccacgactgaccatt
cacgctccacctcaagaattgggtccaccagttcagagaattcagatgacccggaggcag
tctgtgggacgtgggcttcaactgactccaggaataggtggcatgcagcagcattttttt
gatgatgaagacagaacagttccaagtaccccaactcttgtggtgccacatcgcactgat
ggatttgctgaagcaattcattccccacaggttgctggtgttcctagatttcggtttgga
ccacctgaagatatgccacagacaagttctagtcactctgaccttggccagcttgcttct
caaggaggtttaggaatgtatgaaacgcctctcttcctagcccatgaagaagagtctggt
ggccgaagtgtccccactactccgctacaggtagcagccccagtgaccgtatttactgag
agtgccacttctgatgcctcagagcatgcctctcagtctgtccccatggtgacgacatcc
actggcactttatccacaacaaatgaaacagcaacaggtgatgatggagatgaagtgttt
gtggaggcagaatctgaaggcattagttcagaggcgagcttagaaattgatagccagcag
gaggaagagccagttcaggcttctgatgagtcggaccttccttccaccagccaggatcct
ccttccagttcgtctgtagatactagtagtagtcaaccaaagcctttcagacgagtaaga
cttcagacaacattgagacaaggtgttcgtggccgtcagtttaacagacagagaggtgtc
agccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
