Loxodonta africana (African savanna elephant): 100668346
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Entry
100668346 CDS
T04351
Symbol
POLR3A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03020
RNA polymerase
lav04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100668346 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100668346 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lav03021
]
100668346 (POLR3A)
Enzymes [BR:
lav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100668346 (POLR3A)
Transcription machinery [BR:
lav03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
100668346 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
100668346
NCBI-ProteinID:
XP_023402903
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYVDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKTICHQCGAFNGTVKKCGLLKIIHEKYK
TNKKIVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANIHFLRKLVQNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLTAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCPSEPALSRNELTLTMESIMQKSEFRC
CQDSFLQEIKKFVKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQLLKEDLPKVV
VQVIPEVSRAVIHIDEQSGKEKYKLLVEGDKPGGPVMATTGVKGNRDHPPKTPLEVEKTL
GIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLML
ASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPNPPKRPLI
FDTNEFHIPLVT
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgggagacggatgtggccaagaaaataagccatatctgcttt
ggcatgaagtcccctgaggagatgcgccagcaggcgcacatccaggtcgtgagcaagaac
ttgtacagccaggacaacaaccacgcccccttgctgtatggggtgctggaccacaggatg
ggcacaagtgagaaggatcgtccttgtgaaacctgtgggaaaaacttggccgactgtctg
ggccactacggatacgttgacttggaattgccttgttttcatgtgggatacttccgagca
gttataggcatcttacagatgatttgcaaaacctgctgccacatcatgctgtcccaggag
gagaagaagcagtttctggactatctaaagaggcccggcctgacctaccttcaaaagcga
ggcctaaagaagaagatctctgataagtgcaggaaaaaaaccatttgccatcagtgtggt
gcttttaatggtactgtaaagaaatgtggattactgaagataattcatgagaaatacaag
accaacaaaaaaatagtggatccaattgtatcaaatttccttcagtcttttgaaacagcc
atcgaacataacaaagaagtagagcccctactgggaagagcccaggaaaacttaaatccc
ttagtagttctgaatttatttaaacgaatccctgctgaagatgtccctctgcttctcatg
aacccggaagctggaaagccctccgacttgattctcacgcgacttttggtgccccctctg
tgtatcaggccctctgttgtgagtgatctgaagtccggcaccaatgaagatgatctgaca
atgaaattgacagaaatcattttcctaaatgatgtcattaaaaagcatcggatatctggc
gctaagacgcagatgatcatggaggactgggacttcctgcagctgcagtgtgccctctac
attaacagcgagctctcaggcattcccctcaacatggcgcccaagaaatggaccagaggt
tttgtccagcgcctgaagggaaaacagggtcgatttagaggcaacctttcaggaaagaga
gtggatttttctggcagaacagtcatctcacccgaccccaacctccggatcgatgaggta
gcggtgccagttcatgtggccaaaattctgacttttcctgaaaaggtgaacaaagcaaac
atccattttttgcggaaactggttcaaaatggccctgaagttcacccaggagccaatttc
attcagcagagacatacgcagatgaaaaggtttttgaagtacggaaatcgggaaaagatg
gctcaggagctcaagtatggcgacatcgtcgagagacatctcatagatggagatgtggtg
ctgttcaaccggcagccctcgctgcacaaactgagcatcatggctcatctggccagggtc
aagccccaccggaccttcagattcaacgagtgtgtctgtacgccctacaacgcagacttc
gatggtgatgaaatgaatcttcatcttcctcaaacagaagaagctaaagcagaggctctt
gttctgatggggactaaagcaaaccttgttaccccaaggaatggggaaccactgattgct
gctattcaggattttctaacaggagcctatctcctcactcttaaagacactttctttgac
cgagccaaggcttgccaaattattgcttcaatattggtcggcaaggatgagaaaatcaaa
gtccgccttccaccccctacaatattgaagcctgtcaccctgtggactggaaagcagatc
ttcagtgtcatcctcagacctagcgatgacaatccagtgagggccaacctgcgaaccaag
ggcaagcagtactgtggcaaaggggaagacctctgcgtcaatgattcctatgttactatc
cagaacagcgagttgatgagtggcagcatggacaagggaacattgggatcgggatccaag
aacaatattttctacattttgctgcgagactgggggcagaatgaagctgctgatgcgatg
tcgcggcttgccaggctggctcccgtctacctctctaaccggggattttccattgggatt
ggtgacgtcacacctggtcaaggactgctgacggccaaatacgagctgctgaatgccggc
tacaaaaaatgtgacgagtacatcgaggccttaaacacgggcaagctgcagcagcagccc
ggctgcacagctgaggagactctggaggccttgatcctgaaggagctgtctgtgatccgg
gaccacgcgggcagcgcctgcctccgagagctcgacaagagcaacagccccctcatcatg
gccctttgtggctccaaaggttccttcatcaacatatcacagatgattgcctgtgtgggc
cagcaggccatcagcggctctcgagtgccagacggctttgaaaacaggtccttgcctcac
tttgaaaaacactccaagctcccagctgccaaaggctttgtggccaatagcttctattcc
ggtttgacaccaaccgagtttttcttccacaccatggctggccgggaaggcctggtcgac
acagccgtgaagacagctgagacagggtacatgcagaggcggcttgtaaaatccctcgaa
gatctctgctcacagtacgatctgactgtccgcagctctactggagatattatccagttc
atttatgggggagacggcttagaccctgcagctatggagggaaaagatgaacccttagag
tttaaaagggttctggacaacatcaaagcggtcttcccgtgtcccagtgagcctgccctc
agtaggaacgagctgaccctgaccatggagtccatcatgcagaagagcgagttccgctgc
tgccaggacagcttcctccaggaaataaaaaaattcgtaaagggggtttctgagaagatc
aagaaaaccagagataaatatggcatcaatgataacggcacgacagagccccgcgtgttg
taccagttggaccggatcacccccacccagatagaaaagtttctggagacctgtagagac
aagtacatgagggcccagatggagcccggctctgcggtgggcgccctctgcgcccagagc
attggcgagccaggcacccagatgaccctgaagactttccacttcgcaggtgtggcctcc
atgaacatcaccctgggcgtgccccgcatcaaagagatcatcaatgcctccaaggccatc
agcactccgatcatcacggctcagctggacaaagatgacgatgctgattacgctcgcctt
gtgaaagggagaattgagaaaaccctcctgggagagatctcagagtacattgaagaagtg
tttctccctgatgattgttttattctcgtcaagctctccctggaacggattagacttctg
agactggaagtgaacgctgagacggtgcggtactccatctgcacgtccaagctgcgtgtg
aagcccggggacgtggctgtgcacggcgaggctgtggtgtgcgtcacccccagggagaac
agcaagagctctatgtactacgtgctccagttgctgaaggaggacctccccaaggtggtg
gtgcaggtaatcccagaggtgtccagggctgtcatccacatcgacgagcagagcgggaag
gagaagtacaagcttctggtggaaggagataaacctggcgggcccgtcatggccaccact
ggggtgaaaggcaaccgggaccaccctccaaaaacacccttagaggtggagaaaaccctg
ggcatcgaagctgcccggacgacaatcatcaacgagatccagtacacgatggtcaaccac
ggcatgagcatcgaccgcaggcacgtgatgctgctctccgacctgatgacctacaagggt
gaggtcctgggcattacaaggtttggcctggcgaagatgaaggagagcgtgctgatgctg
gcgtccttcgagaagacagcggaccacctctttgacgctgcctactttgggcagaaggat
tctgtgtgtggagtgtctgagtgcatcatcatgggaattccaatgaacatcggaaccggg
ctcttcaagctgctccacaaggccgacagggacccaaaccctcccaagaggcccctgatc
ttcgacacaaacgaattccatattccccttgtcacctag
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integrated database retrieval system
