KEGG   Loxodonta africana (African savanna elephant): 100675007
Entry
100675007         CDS       T04351                                 
Symbol
CD4
Name
(RefSeq) LOW QUALITY PROTEIN: T-cell surface glycoprotein CD4
  KO
K06454  T-cell surface glycoprotein CD4
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav03250  Viral life cycle - HIV-1
lav03260  Virion - Human immunodeficiency virus
lav04060  Cytokine-cytokine receptor interaction
lav04514  Cell adhesion molecules
lav04612  Antigen processing and presentation
lav04640  Hematopoietic cell lineage
lav04658  Th1 and Th2 cell differentiation
lav04659  Th17 cell differentiation
lav04660  T cell receptor signaling pathway
lav05135  Yersinia infection
lav05166  Human T-cell leukemia virus 1 infection
lav05170  Human immunodeficiency virus 1 infection
lav05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
lav05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:lav00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100675007 (CD4)
   03260 Virion - Human immunodeficiency virus
    100675007 (CD4)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100675007 (CD4)
   04514 Cell adhesion molecules
    100675007 (CD4)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100675007 (CD4)
   04612 Antigen processing and presentation
    100675007 (CD4)
   04660 T cell receptor signaling pathway
    100675007 (CD4)
   04658 Th1 and Th2 cell differentiation
    100675007 (CD4)
   04659 Th17 cell differentiation
    100675007 (CD4)
 09160 Human Diseases
  09161 Cancer: overview
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    100675007 (CD4)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100675007 (CD4)
   05170 Human immunodeficiency virus 1 infection
    100675007 (CD4)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    100675007 (CD4)
  09163 Immune disease
   05340 Primary immunodeficiency
    100675007 (CD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:lav04090]
    100675007 (CD4)
CD molecules [BR:lav04090]
 Proteins
  100675007 (CD4)
SSDB
Motif
Pfam: CD4-extracel C2-set ig Ig_3 V-set Ig_2 I-set V-set_CD47 Receptor_2B4 Ig_5 RdRP_3 Psg1 FtsK_gamma
Other DBs
NCBI-GeneID: 100675007
NCBI-ProteinID: XP_023404487
LinkDB
Position
Unknown
AA seq 385 aa
MKWRASFRHLLLVLQLALLPAVTQGKEMMLSEEGQMVELPCTASKKKNMVFSWKYSDGTK
ILSNQASPWQTFCTPAQSWLKSRIECKKNLWDQGYFPLIIKNLEMKDSGNYICEVENKKE
EVQLMVFRLTASSGVHVLQGKXLTLILGEPSDRRRFSPIPPPAFQEDSTTIYKKDGEQVK
FSFPLTFKDKDLTGELKWQAEGASSPKTWITFSLNNKKVSTSYIQKRLQMSEALPLSFTL
PQALPQYAGFGNLTLDLAEGKLHQKVSLVVMRVTQLQNNLTCEVLGPISPKMSLSLQIEN
QTTKVLKQQKLVQVSNPEEGRWLCLLSDEGKVLLESKVEVLPKMFQSKVLLAIGLGGGIG
LLLFTGLGIFCCVRHQRRRVSEPPQ
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgaaatggagagcctctttcaggcacctgctcctggtgctgcaactggcactgcttcca
gcagtcactcagggaaaggaaatgatgctgagtgaagaaggccagatggtggagctaccc
tgcacagcttccaagaagaagaacatggtcttcagctggaaatattctgatgggaccaag
attctgagcaaccaagcctccccctggcaaaccttctgtacaccagctcaatcttggctg
aaaagtcgcattgaatgcaaaaaaaacctgtgggaccaaggatactttcctctgatcatc
aagaatcttgagatgaaagactcagggaattacatctgtgaagtggagaacaagaaggaa
gaggttcaattgatggtgttcagattgactgccagttctggagtccacgtgctgcaggga
aaanngctcacattgatcttaggagagccttctgatagacgcaggttctctcccatccca
cctccagctttccaggaggactccaccacaatctataagaaagacggggagcaggtgaaa
ttctccttcccacttaccttcaaagataaagacctgactggggagctgaaatggcaggca
gagggggcttcctcccccaagacctggatcaccttctccttgaacaacaagaaggtgtcc
acatcatatatacagaagaggctccagatgagtgaggcgttgccgctcagcttcaccctg
ccccaggccttgcctcagtatgctggttttggaaacctgaccctggatcttgccgaagga
aagctacatcagaaagtgagccttgtggtgatgagagtgactcagctccagaacaatctg
acctgtgaggtgctgggacccatctcccccaagatgagtctgagcctgcagatagagaac
cagacgacaaaggtcttgaagcagcagaagctggtgcaggtgtcgaaccctgaagaggga
cggtggttgtgtctgctgagtgacgagggcaaggtcctgctggaatccaaggttgaggtt
ttgcccaaaatgttccagtccaaagtgctcctggctatagggctgggtggcggcataggc
ctgctgcttttcactgggttgggcatcttctgctgtgtcaggcaccagcgccggcgggtg
agtgagcctccccag

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