Loxodonta africana (African savanna elephant): 100675878
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Entry
100675878 CDS
T04351
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04721
Synaptic vesicle cycle
lav04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
100675878 (SLC6A4)
04721 Synaptic vesicle cycle
100675878 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lav02000
]
100675878 (SLC6A4)
Transporters [BR:
lav02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
100675878 (SLC6A4)
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Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
100675878
NCBI-ProteinID:
XP_003416833
UniProt:
G3T8W3
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All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQKELSECKDGEDCQGNGALRKGVPAPGDKAEPGQISNGYSSVPSPGAGDDTQ
HSTPAATTTLVAEVHQVERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYLELALGQYHRNGCISIWRKICPIFKGIGYTICVIAFYIASYYNTII
AWALYYLISSFTNQLPWTSCQNPWNTGNCTNYFSQDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDECPHIWAKRREWFVLGVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVVLVEAVAVSWFYGVTRFCSDVKEMLGFSPGWFWRIC
WMAISPLFLLFIICSFLMSPPELRLFQYNYPRWSVILGYCIGTSSFICIPTYITYRLITT
PGTFKERIIKSITPETPTEIPYGDICLDAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccactcccttaaattctcagaaggagctgtcagagtgtaaggatggagaagat
tgtcagggaaacggagctctacggaaaggtgtccctgccccaggggataaagcggaacct
ggccaaatctccaatgggtactcatcggttcccagccctggtgcaggagatgacacccag
cactccaccccagcagccaccaccaccctagtggccgaagttcatcaggtggaacgggag
acctggggcaagaaggtggatttccttctctcagttattggctatgctgtggacctgggc
aacgtgtggcgctttccctacatttgttaccagaatggaggaggggcgttcctcctcccc
tacaccatcatggccattttcggagggatcccactcttctacctggagctggcgctgggc
cagtaccacagaaacggatgcatttcaatatggcggaaaatctgcccaatcttcaaagga
atcggttacaccatctgtgtcattgccttctacattgcctcctactacaacactatcatt
gcctgggcgctctactacctcatctcctccttcaccaaccagctgccctggaccagctgc
cagaacccctggaacacgggcaactgcaccaactacttctcccaggacaacatcacctgg
accctccactccacctccccagctgaagagttttacacacgccacgtcctgcagatacac
cggtctaagggactccaggacctggggggcatcagctggcagcttgccctctgcatcatg
ctgatcttcaccattatctacttcagcatctggaaaggcgtcaaaacatctggcaaggtg
gtgtgggtgacagctacattcccctatatcatcctctctatcctgctggtgaggggagcc
accctccctggagcctggaggggtgttctcttttacctgaaacccaactggcagaaactt
ctggagacaggggtgtgggtggatgccgcggctcagatcttcttctctcttggtcctggc
tttggggttctactggcttttgctagctacaacaaattcaacaacaactgttatcaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcgtttcgggatttgtcatcttc
acagtcctcgggtatatggctgaaatgaggaatgaagatgtttctgaggtggccaaagac
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccagcatct
acgttctttgctatcatcttcttcctgatgttaatcacgctgggcttggacagcacgttt
gcaggcttggagggggtgattacggctgtgctggatgagtgtccccacatctgggccaag
cgtcgggagtggtttgtgcttggagtggtcatcacctgcttctttggatccctggtcacc
ctgacttttggaggagcctacgtggtgaaactgctggaggaatatgccacggggcctgca
gtcctcaccgtcgtgcttgttgaagcagttgccgtgtcttggttctatggcgtcactcgg
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tggatggccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccc
ccagagttacggctcttccaatataattacccccgctggagtgtcatcttgggttactgc
ataggaacgtcgtctttcatctgcatccctacatatataacttaccggctgatcaccact
ccagggacctttaaggagcgtattattaaaagtatcactccagaaacaccaacagaaatt
ccctatggggacatctgcttggatgctgtgtaa
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