Lysobacter avium: INQ42_02885
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Entry
INQ42_02885 CDS
T08144
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
lavi
Lysobacter avium
Pathway
lavi00020
Citrate cycle (TCA cycle)
lavi00640
Propanoate metabolism
lavi00660
C5-Branched dibasic acid metabolism
lavi01100
Metabolic pathways
lavi01110
Biosynthesis of secondary metabolites
lavi01120
Microbial metabolism in diverse environments
lavi01200
Carbon metabolism
Module
lavi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lavi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
INQ42_02885 (sucD)
00640 Propanoate metabolism
INQ42_02885 (sucD)
00660 C5-Branched dibasic acid metabolism
INQ42_02885 (sucD)
Enzymes [BR:
lavi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
INQ42_02885 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
IlvN
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QOW22561
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All DBs
Position
640664..641539
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AA seq
291 aa
AA seq
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MSVLINKNTKVIVQGFTGSQGTFHAEQMLEYGTKVVGGVTPGKGGTTHLDLPVFNTVADA
VEQTGADASVIYVPPAFAADAILEAADAGITVIVCITEGIPVLDMLRVKNVLNDYEDVVL
IGPNCPGVITPGECKIGIMPGHIHTVGKIGIVSRSGTLTYEAVKQTTDVGLGQSTVIGIG
GDPIHGLDFIDCLKLFQDDEQTEGIIMVGEIGGSAEEEAAEFIAQYVTKPVVGFIAGASA
PEGKRMGHAGAIASGGQGTAEGKFAAMEKAGVTTVKSPGDLGAAIAKLLAK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttgatcaacaagaacaccaaggtgatcgtgcagggcttcaccggctcgcag
ggcaccttccacgccgagcagatgctcgagtacggcacgaaggtcgtcggcggcgtcacc
ccgggcaagggcggcaccacgcacctggacctgccggtcttcaacacggtcgccgacgcg
gtcgagcagaccggtgcggacgcctcggtcatctacgtgccgccggcgttcgccgccgac
gcgatccttgaagccgccgacgccggcatcaccgtcatcgtgtgcatcactgagggcatc
ccggtactggacatgctgcgggtcaagaacgtgctcaacgactacgaagacgtcgtgctg
atcggcccgaactgccccggcgtgatcacccccggcgagtgcaagatcggcatcatgccc
ggccacatccacaccgtcggcaagatcggcatcgtcagccgctccggcaccctgacctac
gaggcggtcaagcagaccaccgacgtcggccttggccagtcgaccgtcatcggcatcggc
ggtgatccgatccacggcctggacttcatcgactgcctgaagctgttccaggacgatgag
cagaccgaaggcatcatcatggtcggcgagatcggcggcagcgccgaggaagaggcggcc
gagttcatcgcgcagtacgtgaccaagccggtcgtcggcttcatcgccggcgccagcgcc
ccggaaggcaagcgcatgggccacgccggtgcgatcgcctcgggcggtcagggcaccgcg
gagggcaagtttgccgcgatggagaaggcgggcgtgaccacggtcaagtcacccggtgac
ctgggcgcggcgattgcgaagctgctggcgaagtaa
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