Leclercia adecarboxylata: APT61_17390
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Entry
APT61_17390 CDS
T04232
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lax
Leclercia adecarboxylata
Pathway
lax00730
Thiamine metabolism
lax01100
Metabolic pathways
lax01240
Biosynthesis of cofactors
lax04122
Sulfur relay system
Module
lax_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
lax00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
APT61_17390
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
APT61_17390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lax03016
]
APT61_17390
Enzymes [BR:
lax01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
APT61_17390
Transfer RNA biogenesis [BR:
lax03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
APT61_17390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ALZ97688
UniProt:
A0A7H0F8G9
LinkDB
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Position
complement(3737331..3738779)
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDHVEVRAKDENKR
LDIREALTRIPGIHHILEVEDVPFTSLHDIFEKALAQYRDQIEGKTFCVRAKRRGKHEFS
SIEVERYVGGGLNQHVESARVRLTNPEVTVNLEIENDRLLLVKGRYEGIGGFPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNVSDTLILRPLISHDKEHIIDLAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEENFDFSILEKVVAEASNIDIREIAQQTEQDVVEVETVNGFGPDDVLLDIRSVDEQD
AKPFEPEGVEVASLPFYKLSTKFGDLDKSKTYLLWCERGVMSRLQALYLREQGFTNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaaattgttcccggaaatcaccatcaaaagccaatctgtgcgtttg
cgctttattaaaattttaaccgggaacattcgtaacgttctgaagcattacgacgagacg
ctggccgtcgtgcgtcactgggatcatgttgaagtccgcgctaaagatgaaaacaagcgc
ctggacattcgtgaagccttaacccgtattccggggatccaccatattctggaagtggaa
gatgttccattcacttccctgcacgacatcttcgaaaaagcgctggcgcagtatcgcgat
cagatcgaaggcaaaactttctgcgtacgcgcaaagcgtcgcggcaaacatgagtttagc
tctattgaagtcgaacgctacgtgggcggcggattgaatcagcacgttgaatctgcgcgt
gtgcgtctgaccaacccggaagtgaccgttaatctggaaatcgagaacgaccgcctgctg
ctggtaaaaggccgctacgaaggtatcggcggtttcccaatcggtactcaggaagatgtg
ctgtcgctgatttccggcggtttcgactccggtgtttccagctatatgctgatgcgccgc
ggctgccgcgtgcactactgcttctttaacctcggcggcgcggcgcatgaaattggcgta
cgtcaggtggcccattatctgtggaaccgcttcggcagctctcaccgtgtgcgttttgtg
gcgatcaactttgaaccggtggtgggcgaaatcctcgagaaagtggacgacggccagatg
ggcgtggtgctgaagcgcatgatggtgcgtgcggcctcgaaagtggctgagcgttatggc
gtgcaggcgctggtgaccggcgaagcgctgggccaggtctccagccagaccctgaccaac
ctgcgtctgatcgacaacgtgtcagataccctgatcctgcgtccgctgatttcgcacgac
aaagaacacatcatcgatctggcgcgtgaaatcggtactgaagacttcgcccgcaccatg
ccggaatactgcggtgtgatctcaaaaagcccgaccgtgaaagcggtgaaggcgaagatc
gaagcggaagaagaaaacttcgatttcagcatacttgagaaagtggtggccgaagcctct
aacattgatatccgcgaaatcgcccagcagaccgagcaggacgtggtggaagttgaaacc
gtaaacggtttcggtcctgacgacgtgctgctggatatccgctctgtggatgagcaggat
gcgaagccgtttgagccggaaggtgtggaagtggcctcgctgccgttctacaagctgagc
accaaatttggcgatctggataagagcaaaacctatctgctgtggtgcgagcgcggggtg
atgagccgtctgcaggcgctctatctgcgcgagcagggctttacgaatgtgaaggtgtat
cgcccgtag
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