Lactobacillus amylovorus GRL1118: LAB52_01195
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Entry
LAB52_01195 CDS
T01954
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lay
Lactobacillus amylovorus GRL1118
Pathway
lay03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAB52_01195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lay03021
]
LAB52_01195
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_01195
Transcription machinery [BR:
lay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAB52_01195
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAB52_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF3632
DUF5611
TPR_20
Motif
Other DBs
NCBI-ProteinID:
AEA31224
LinkDB
All DBs
Position
238175..238732
Genome browser
AA seq
185 aa
AA seq
DB search
MGLDKFKDKNRDELSMIEVARAILEDNGKRMAFADIVNAVQKYLNKSDEEIRERLPQFYT
DMNTDGEFISMGENVWALRSWFPYESVDEEVNHPEDEDEDDARKHHKKVNAFLASATGDD
DIIDYDNDDPEDDDLDATADDSDDDYGDDDSDYDEDNDDTDDVLPDGIEGQLSQLNDDDD
DEEDN
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagacaaatttaaagacaaaaaccgcgacgaattatcaatgatcgaagttgct
cgtgcaattttggaagataatggtaagagaatggcatttgccgatattgttaatgccgta
caaaaatacttgaacaagagtgacgaagaaattcgtgaacgtttgccacaattctatact
gacatgaacaccgatggtgaatttatttccatgggtgaaaatgtttgggcacttcgctca
tggttcccatacgaatcagttgacgaagaagttaaccacccagaagatgaagacgaagac
gatgcacgtaagcaccacaagaaggttaatgccttcttagccagtgcaactggtgacgat
gacatcatcgactacgacaatgacgacccagaagacgacgacttagatgccactgctgat
gatagcgatgacgactacggcgacgacgattctgattacgatgaagataacgatgatact
gatgacgtattgccagacggtatcgaaggtcaattgtcacaattaaacgatgacgatgat
gacgaagaagataattaa
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