Lycium barbarum (goji berry): 132599989
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Entry
132599989 CDS
T09483
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132599989
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lbb01009
]
132599989
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132599989
03036 Chromosome and associated proteins [BR:
lbb03036
]
132599989
Protein phosphatases and associated proteins [BR:
lbb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
132599989
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
132599989
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
132599989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
PDS5
HEAT_EZ
CLASP_N
SCD
Adaptin_N
Cnd1
TAF6_C
Motif
Other DBs
NCBI-GeneID:
132599989
NCBI-ProteinID:
XP_060169114
LinkDB
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Position
1:157538495..157547697
Genome browser
AA seq
581 aa
AA seq
DB search
MSVIDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHARVLLPPLEGLCSVEETCVREKAVESLCRIGSQMRES
DLVESFIPLVKRLAAGEWFTARVSSCGLLHIAYPSAPEPLKNELRTIYSQLCQDDMPMVR
RAAATNLGKFAATIEQPHLKTDIMSMFETLTQDDQDSVRLLAVEECAALGKLLEPKDCVA
QILPVIVSFAQDKSWRVRYMVANQLYELCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPTWAMEHIIPQV
LDMINDPHYLYRMTILHAISLLAPVMGSEITCSKLLPVIITASKDRVPNIKFNVAKVLQS
VIPIVEKSVVENTIRPCLVELSEDPDVDVRFFANQALQATK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgattgatgaaccgctgtatccaattgcggtattgattgatgagttgaagaat
gaagacatccagcttagattgaattcaatccggcgcttgtctaccatcgcccgtgctctt
ggtgaggagagaactcggaaagagttgattccatttctaagtgagaacaacgatgacgat
gatgaagttcttcttgcaatggccgaagagttgggggtgtttattccatacgttggaggg
gttgaacatgcgcgtgtattgcttccacccttggaaggtctttgtagtgtcgaagagact
tgtgttagggaaaaggcagttgagtcattgtgcagaattgggtctcaaatgagggaatca
gacttggtggaatcatttattccacttgtgaagagactggctgctggagagtggtttact
gctcgagtttcgtcctgtgggttgcttcacattgcctatcctagtgctccagagccatta
aagaatgagctgagaaccatctatagccaactttgccaagatgatatgcctatggtgagg
agagcagctgctacaaatcttggaaagtttgctgcgactattgaacaaccccatttgaag
actgacatcatgtcaatgtttgagaccttaacacaggatgatcaagattctgtccgttta
ttggctgttgaggaatgtgctgctttggggaagctgctggagcctaaagactgtgtagca
cagattctgcccgtcatagttagttttgcgcaggataagtcttggcgtgttcgttacatg
gttgcaaatcaactttatgaactttgtgaggcagttggaccggaggctaccaggacggat
ttggtccctgcctatgttcggctacttcgtgataatgaggctgaagtgcgtatagctgct
gctgggaaggtgacgaagttttgccgtattttgagccctgaacttgctatccaacatatc
cttccttgtgtaaaggaactatcatcagattcatcccagcatgttcgttctgctttggct
tcagttatcatgggaatggcgcctattttaggaaaggatgcaactatcgagcagcttctc
ccgattttcctctctcttctgaaagatgagtttcctgatgttcgtttgaatattatcagc
aagcttgatcaagtaaaccaggtaatcggaattgatttgctctcccaatcactgctgcca
gctattgttgaacttgcagaggatagacattggagggttcggcttgcaataattgagtac
atacctctattggcaagtcagctgggggtcggcttttttgatgacaagcttggtgctctg
tgcatgcagtggctaaaagataaggtttactctattagagatgcagcagcaaacaatgtt
aagcgccttgctgaggaatttggtccaacatgggcaatggagcatataattccacaggtg
ttggatatgattaatgacccacattatctttaccgaatgaccatccttcatgcaatttct
cttcttgcccctgtaatgggctcagaaattacttgctccaaacttctgccggttataatt
actgcatcaaaagacagggtaccgaatatcaagttcaatgttgctaaggtgttgcagtct
gttattccaatagttgaaaaatctgttgtggagaacacaattcgaccgtgtttggttgaa
ctcagcgaggacccagatgttgatgttaggtttttcgctaaccaagccctacaagcaacc
aagtga
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