Lycium barbarum (goji berry): 132607458
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Entry
132607458 CDS
T09483
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00906
Carotenoid biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Module
lbb_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
132607458
Enzymes [BR:
lbb01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
132607458
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Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
FAD_oxidored
HI0933_like
Pyr_redox_3
NAD_binding_8
Pyr_redox
FAD_binding_2
FAD_binding_3
Trp_halogenase
GIDA
Motif
Other DBs
NCBI-GeneID:
132607458
NCBI-ProteinID:
XP_060177412
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Position
8:complement(130600074..130602405)
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AA seq
501 aa
AA seq
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MDTLLKTPNNLEFLQPLHGFSVKVSNFTSVKPQKFGSRKSCENWGKRVCVRARNSSTLLE
LVPATKKENLDFELPMYDPTKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSPKLI
WPNNYGVWVDEFEAMDLLDCLDATWSGAVVYVDDDRMKNLDRPYGRVNRKQLKSKMMQKC
ILNGVKFHQAKVIKVIHEEAKSMLICNDGVTIQAKVVLDATGFSRCLVQYDKPYNPGYQV
AYGILAEVEEHPFDTDKMLFMDWRDSHLNNNMELKERNRKVPTFLYAMPFSSNRIFLEET
SLVARPGLRMDDIQERMVARLSHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVGIGGTAG
MVHPSTGYMVARTLAAAPIVAKAIIQYFGSEKNHLGNELSASVWKDLWPIERRRQREFFC
FGMDVLLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELMFFGLSLFSHASNTSRIE
IMTKGTLPLVNMINNLLQDSE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggatacactgttgaaaaccccaaataaccttgaatttctgcaaccccttcatggattt
tctgttaaagttagcaactttacctctgtaaagcctcagaaatttggttctaggaaatct
tgtgagaattggggtaaaagggtttgtgttagagctaggaatagtagtacacttttggag
cttgtacctgcgacaaaaaaggaaaatcttgattttgagcttcctatgtatgaccctaca
aaagggcttgttgtagatttagctgtggttggtggtggacctgctggtcttgctgttgca
caacaggtttctgaggctggattatccgtttgctcgattgacccctccccgaaattgata
tggcctaataactatggtgtttgggttgatgaatttgaggccatggatttgttggattgc
cttgatgctacatggtcaggtgctgttgtttatgtggatgatgataggatgaagaatctt
gatagaccttatggacgggttaataggaaacagctcaagtccaaaatgatgcagaaatgt
atactaaatggtgttaaattccaccaagccaaagttataaaggtaattcatgaggaagct
aaatctatgctgatttgcaatgatggtgtaactattcaggcaaaagtggttcttgatgca
actggcttctctagatgtcttgttcagtatgataagccatataatcctgggtatcaagta
gcttatggcatattagccgaagtggaggaacatcccttcgatacagataagatgcttttc
atggattggcgagattctcatcttaataataatatggagctaaaggagagaaatagaaaa
gttccaacttttttatacgccatgccattttcatcaaatagaatatttctcgaagaaaca
tcccttgtagctcgtcctggattacgtatggatgatattcaagaaagaatggtggctcgt
ttaagtcacttgggtataaaagttaagagcattgaagaggacgaacgttgtgtaattccg
atgggagggccccttccggtattacctcagagagtggtcggaattggtggtactgctggc
atggttcatccttcaacaggttatatggtagcaaggactttagctgcagctcctatcgtt
gctaaagcaataattcagtactttggttctgagaaaaaccatctaggtaatgagttgtca
gcatctgtttggaaggatttgtggcccattgaaaggagacgtcaaagagaattcttttgc
tttggtatggatgttcttctaaagcttgatttacccgctacgagaaggttttttgatgcc
ttttttgatctagaacctcgttattggcatgggttcttgtcatctcggctgtttcttcct
gagcttatgtttttcggattgtcccttttctctcacgcttcaaatacttctagaatagag
attatgacaaagggaactcttcctttggtaaatatgatcaacaatttgttacaggattca
gaataa
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