Lycium barbarum (goji berry): 132609666
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Entry
132609666 CDS
T09483
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00270
Cysteine and methionine metabolism
lbb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
132609666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132609666
03032 DNA replication proteins [BR:
lbb03032
]
132609666
03036 Chromosome and associated proteins [BR:
lbb03036
]
132609666
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lbb02048
]
132609666
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
132609666
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
132609666
DNA replication proteins [BR:
lbb03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
132609666
Chromosome and associated proteins [BR:
lbb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132609666
Prokaryotic defense system [BR:
lbb02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
132609666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Motif
Other DBs
NCBI-GeneID:
132609666
NCBI-ProteinID:
XP_060179737
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All DBs
Position
9:complement(119720718..119737499)
Genome browser
AA seq
1177 aa
AA seq
DB search
MPQMATEENHNKTSRIPSNLTPSPQKNKPISPNQDALALSFPRNEEPVPLEVFYPCEDDK
NNNLLKRRSSRFTINKFSTSAAAATTTTDKKDMKNNLEKCKGKSVNSRKSEGIKEAELSR
KRKYKNEEKLELLALEESSASGTRATSKRSGTKRELLALLTPNSGAFNTRALRGSGSVNV
GHNSLELLALTESASVTRSAGGTKRELLALVKPEGKNSASVTRAACKKSCTKRGMPEPKE
SASGTRADGEEEMGETPKSQSNSNGAKLELLALPESASFPRAASKKYGTKRELMALLTPE
SSAWKKRASGGSDSVNVGGHDSRGSWRKDSVFTESPETSEVKTLRSRKIQVSVNNNSSDD
NNKGSDVKRKKSSGKNGSVNNSSDSAEKSVKKQKSNVCFIGEPIPAEEAQEKWQWRYDLK
NKKTQRQGWKLNAGEEDEIVLNVECHYAQAKVAGFIFNIGDCAYVKGEGKKKHIGRILEF
FKTTEGDDYFRVQWFFRAEDTVLKGAASFHDPKRIFYSTLENDNLLDCIVSKVNVVELPT
RHVDRKDVPPAHFYYDMEYCVDYSTFHTLHNVKSSISPSLVDDASYKPITTYPLEVLPTC
EPMKVELSLLDLYAGCGGMSMGLCLGTKLSGLNLVTKWAVDFNRSACDSLKLNHPQTHVR
NEGVEDFLELLKRWEKLIQSYGCSDFKTSSNCELDERDEGENKDKSQAGSKASSGEYEVL
RLVDICYGDPNNKGKSRLHFKVRWKGYSPSDDTWEPIENLGNCGDSIKDFVRRGQQLKIL
PLPGDVDMICGGPPCQGISGYNRHRNVDDPLSDEKNRQIIIFMDVVEFLRPKYVLMENVS
DILRFDKASLGRYALSRLVHMKYQARLGTMAAGCYGLPQFRLRVFFWGALSSERLPPFPL
PSHDVIVKYWPSPEFERNTVAYEEGQLRDLEEALVLRDAISDMPAVTWHETREEMPYEMP
PQTEFQKYIRLSKHEIMSCSSSGVTETKEPVLSDHRPCQLNEDDYLRVCLVPHRKGANFR
DLPGVIVGADNVAHRDTNEPKVLPNGKPMVPDCAFSFEHGKSKRPFARLWWDETVATLVT
FPNHRAQAILHPEQDRVLTIREYARLQGFPDFYRFTGTLKERYCQVGNAVAVPVGRALGY
ALGLAYQRLAGNEPLIKLPSNFSFLTPPIDDIVVLQN
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaatggctactgaggaaaaccataacaaaacttcaagaatcccttcaaatcta
actccatcaccacaaaaaaacaaacccatttcaccaaatcaagatgcattggctctatca
tttcctagaaatgaagaaccagttccattagaagtattttacccgtgtgaggacgacaaa
aacaataacctattaaagagaagatcttctagatttactattaacaagttcagtactagt
gctgctgctgctactactactacagacaaaaaagacatgaaaaacaatttggaaaaatgt
aagggcaaaagtgtaaattcaaggaaatcagagggtataaaagaagcggaattgtcgagg
aaaaggaagtataagaatgaagaaaaattagagttgttggcattggaggaaagcagcgcg
tcgggtacacgcgccactagtaaaagaagcggtacgaagagggaattgctggctttgctg
acaccgaacagcggcgcgtttaacacacgcgccttaagggggagtggttcagtaaatgta
ggtcacaattcattagagttgttggcattgacggagagcgcgtcggttacacgctccgcc
ggcggcacgaagagagaattgcttgctttggtcaaaccagagggtaagaacagcgcgtcg
gttacacgcgccgcctgtaagaagagctgtacgaagagaggaatgccggagccaaaggaa
agcgcgtcgggtacacgcgccgacggtgaggaggaaatgggtgaaaccccaaaatcgcaa
tccaactctaatggagctaaactggagttgttggcattgccggaaagcgcgtcgtttcca
cgcgccgccagtaaaaagtacggcacgaagagggaactgatggctttgctgacaccagag
agcagcgcgtggaagaaacgcgcttccgggggaagtgattcagtaaatgtgggtggtcac
gattcccgaggatcttggagaaaagattcagtttttactgaatctcctgaaacatcggaa
gtgaagactttgagatcaagaaaaatacaagtgagtgttaataataatagcagtgatgat
aataataaagggtcagatgtgaaaaggaaaaaatcatcaggaaaaaatgggagtgttaat
aattcatcagattcagcagagaaaagtgtgaagaaacagaagagtaatgtatgttttatt
ggggagccaatacctgctgaggaagctcaagaaaagtggcaatggcgttacgacttgaag
aataaaaagacgcagcgtcaaggctggaaattaaatgctggtgaagaagatgaaatcgta
ttaaatgtggaatgccattatgctcaagctaaggttgctggtttcattttcaatattggg
gattgtgcatatgtaaagggtgaaggcaagaaaaaacatattggcaggatcttagagttt
ttcaagacaacagagggggacgattattttagagtacaatggttcttcagagctgaagat
acggtgttgaaaggtgctgcttctttccatgacccaaagcgcatattctattctacttta
gagaatgataatttactagactgcatagtttccaaagtcaatgtggtagaattaccaacc
aggcatgtggatagaaaggatgttccacctgctcacttttattacgacatggaatactgt
gttgactattccacattccatacattgcataatgtcaagagttccatttccccttcgctg
gtggatgacgcttcatataagcctattactacatatcctctggaggtattgccaacttgt
gaacctatgaaagtagagttgtcattattggatctatatgctggttgtggtggcatgtct
atggggttgtgccttggtaccaaactctctggtcttaatcttgtgacgaaatgggctgtt
gattttaataggtctgcttgtgatagcttgaaactgaatcatcctcagacacatgttagg
aatgaaggtgttgaggattttctggagctactgaaaagatgggagaagctaattcagtcg
tatggctgtagtgatttcaaaacaagctcaaattgtgagctagatgagagagatgaaggt
gaaaacaaagataaatcccaagctggttctaaagcatcttcgggagaatatgaggtatta
agattagttgacatatgttacggggatcccaacaacaaaggaaaatctcgacttcatttt
aaggtgcggtggaaaggttatagtccaagtgatgatacttgggagccaattgagaacttg
ggaaattgcggagacagcataaaagattttgttagaagggggcagcaattgaaaattctg
cctctaccaggagatgttgatatgatatgtgggggtcctccttgtcagggcatcagtgga
tataatcgccacagaaatgttgatgacccattgtctgatgagaaaaatcgtcaaattatt
atctttatggatgttgtggaatttttacggcctaaatatgtgttgatggaaaatgtttct
gacatattgaggttcgataaagcatctcttggaagatatgctttaagtcgtttggtacat
atgaaataccaagcaagacttggaactatggcagctggttgttatggtctcccacaattt
cggctgcgagttttcttttggggtgcactttcgagtgagaggttgcccccatttccactt
ccttcgcatgacgtgattgttaaatattggccctcacctgaatttgagcggaatactgtt
gcttatgaagaaggacaactacgtgaccttgaggaagctcttgttcttcgtgatgctata
tctgatatgccagctgtcacatggcatgaaactcgtgaagaaatgccatatgagatgccc
ccacaaacagagtttcagaaatacataagactatctaaacatgagataatgagttgttca
tcaagtggagtcacggaaacaaaagaacctgttttgtctgatcatcggccttgccaatta
aacgaggacgattacttgcgagtttgtctagtcccacatagaaagggagcgaatttcaga
gacctccctggtgtaattgtgggagcggataatgtggctcatcgtgatacaaatgagcca
aaagtcttaccaaatggaaagcccatggttcctgattgtgccttcagttttgagcatgga
aagtctaaaaggccatttgcgagattgtggtgggatgaaacagtagcaacattagtcacg
tttcctaatcatcgtgcacaggctatcttacacccagagcaggatcgggttctgaccata
cgagaatatgcaagattgcaaggttttccagatttctataggtttactggtactctcaag
gaaaggtattgccaagtcgggaatgccgtagcagttcctgttgggcgagcgctcgggtat
gcacttggacttgcctatcagaggctagctggaaatgagcctcttattaaattgccatca
aatttctcattcttaacgcctccgattgatgacattgttgtcttgcaaaattga
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