Lycium barbarum (goji berry): 132622302
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Entry
132622302 CDS
T09483
Name
(RefSeq) alpha-farnesene synthase-like
KO
K14173
alpha-farnesene synthase [EC:
4.2.3.46
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00909
Sesquiterpenoid and triterpenoid biosynthesis
lbb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
132622302
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.46 alpha-farnesene synthase
132622302
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Cas5fv_helical
Motif
Other DBs
NCBI-GeneID:
132622302
NCBI-ProteinID:
XP_060192871
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Position
12:complement(87746762..87751431)
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AA seq
559 aa
AA seq
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MASEQQSVFCNQMQSEAFGEIKIDQSLIQRRNANYKPNIWNYDILQSLKSEYSDGKYITE
AQKLKEEVLCHLAEMVNPLAKLELIDSINKMALSHLFEKEIMLCLQDMEYAKKKDSGGEM
YLYSTALYFRIFRQHGYKVTQDVFLSYMDKLGDQFEVDANMDPKTMVQLFEASHLALKDE
NMLNEARIFCTKNLKSSNIIPMEMPLHWQVEWYNTRGKISKQENEQRGPNFKLLQLAKLN
FNMVQAEHQKDLVDILRWWRKLGLIEHLSFSRDRIVESFLWSVGVAFEPQHSNFRNLLTK
AITFIILIDDVYDIYGSLQHLQLFTNAVVRWDPKEVEQLPLCMKTCFWKLYDTTNDVALA
IQQQKGWKLPVSTYLQKAWAEFCKALLVEAKWDAKGYTPSFSDYLDNGWKSSGGPVLSLH
VLLGLAQDFTQVMDFLENEYDLIHNSSLIIRLCNDLGTSAAELKRGDVSSSVLCYMKEAD
VEEDVAREDIKDMVMETWKKMNKYCFDNSALSLGPLIKYIMNIARVTHFIYQNGDGFGVQ
DRETQQQILSSLIESLPLE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgagcagcaatctgtcttttgtaaccaaatgcagagtgaagcatttggtgag
attaagatagatcaaagcctcattcaacgacgaaatgctaattacaagccaaacatttgg
aattacgacatcttgcagtctcttaaaagcgaatattcagatgggaaatacataacagaa
gctcaaaagttgaaagaggaagttttatgccatctggcagaaatggtgaatccattggcc
aaattagagcttatagacagcataaataaaatggctctctcccatctctttgagaaggag
atcatgttgtgtctacaagacatggaatatgcaaagaagaaggattctggcggtgaaatg
tatctctattctactgccttatattttagaatttttcggcagcatggctataaagtgaca
caagatgtattccttagctatatggataaattgggtgatcaattcgaggtagacgcaaac
atggatccaaaaacaatggtgcaactatttgaagcctctcacttggctttaaaggatgaa
aatatgttgaatgaggctagaatattttgcactaagaatctaaaaagttcaaatattatt
ccaatggaaatgccactgcattggcaggtggaatggtacaacaccagagggaaaatatcc
aaacaggaaaatgaacaaagggggccaaactttaaacttcttcaactagctaaactcaac
tttaatatggtccaagctgagcatcagaaagatctggtagatattctgaggtggtggaga
aaacttggactgatagaacatctaagcttcagcagagatagaattgtcgaaagctttttg
tggtcagttggcgttgctttcgagcctcaacattctaatttcagaaatttgctcaccaaa
gccatcactttcattatactaattgacgatgtttatgacatttatggctctttacaacac
ctacaactcttcaccaatgctgttgtcagatgggaccctaaggaggttgagcaacttcca
ttatgtatgaaaacctgtttttggaaactatatgatactacaaatgatgtagcacttgca
attcagcaacaaaaaggttggaaattaccagtgtccacatatctacaaaaagcgtgggct
gaattttgcaaagcactgcttgtggaagctaaatgggatgcaaagggttatacaccatca
ttttctgattatttagataatgggtggaaatcatcaggtggccctgtgctctctcttcat
gttcttcttggtttagctcaagatttcacacaagttatggattttctggagaatgaatac
gaccttatacacaattcctcccttataatccgactttgcaacgaccttgggacttcagcc
gctgaactgaaaagaggtgatgtgtcatcgtctgtcttgtgttacatgaaggaagcagat
gttgaggaggatgtggcaagggaggatatcaaagacatggtgatggagacttggaagaaa
atgaacaaatattgctttgacaattcagcattatcactgggaccattaataaagtacata
atgaatatagcgcgagtcacacacttcatttatcaaaatggagatggatttggtgttcaa
gatagagaaactcaacaacaaatcttatcttctttgattgaatctctacctctcgaatga
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