Lycium barbarum (goji berry): 132625094
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Entry
132625094 CDS
T09483
Name
(RefSeq) alpha-farnesene synthase-like
KO
K14173
alpha-farnesene synthase [EC:
4.2.3.46
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00909
Sesquiterpenoid and triterpenoid biosynthesis
lbb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
132625094
Enzymes [BR:
lbb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.46 alpha-farnesene synthase
132625094
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
132625094
NCBI-ProteinID:
XP_060195849
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Position
12:complement(87786281..87794985)
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AA seq
567 aa
AA seq
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MILSQTMACRNIMSILSTMQTQKLYTTKKQSHPEKRISTYKPNTWKYDHLLSLTSQYSEE
KYKVQAEKLKEEVSCTFSNTHDPMALLELIDRIDKLALSGYFEDETKEALEKIVMCMNSG
VNYSSSKEEDLYATALCFRLLREHGYHASQDMLKDFFDGKGKLVTKKVSDIKTLLELLEG
SYLSMDGENLLNDKNLKSILSISPDIDSFTNSLNYPLARRVRWYDVRKHIYAQDVLEGNN
NPMLLKLAKLNFNIIQATHQKDLKDVIRWWRNLSIVEDLYFTRDRIVESFFYAVGIASEP
QHGSMRKWLTKVIQLILIIDDVYDIYGSLADVQKFTRAIEKWDANEVQLLPECMQICFRA
LDDTMQEISFEIQEQKCGSSALPYLKQVWVNFCKSLLVEAMWYRKGHIPTLAEYLDNGLI
SSSGPLLSFHVMFGLTNEIISERLDLCANFQEIVYHTSIIIRLCNDQGTSAAELERGDVA
SSILCYMQEENVSEDVAREHIESIILDSWKKINYHFSTLSTSHRKLVKHVINEARMAYVM
YQFGDGFGVQDGKTRDEVLFNLFEPIT
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgatactatctcaaaccatggcttgcagaaacattatgtccattttatccaccatgcag
acacagaaactttacactacgaaaaaacaaagtcatcctgaaaagaggatttctacctat
aaaccaaacacttggaaatatgatcatctgctttctcttacaagtcaatattctgaagag
aagtacaaagttcaagctgagaagctaaaagaggaagtgagttgcacattttcaaacact
catgacccaatggcccttctagagcttatagacagaattgacaagcttgccctcagtggt
tacttcgaggatgaaaccaaggaagctttggaaaagattgttatgtgcatgaatagtggt
gttaattattcaagctcaaaggaggaggatctctatgccactgcattgtgcttcaggctc
ctcagggaacatggctaccatgcttcacaagatatgttaaaggacttcttcgatggcaaa
gggaaactcgtgacaaagaaagtctcagatatcaaaacattattggagcttttggaagga
tcatatctgagcatggatggtgaaaatttactaaacgacaaaaacctcaagagtatttta
tctatatcaccggatattgacagttttactaatagcttgaattatccgttggcaagaaga
gtaagatggtatgacgttagaaaacacatatatgcccaagatgtactagaaggcaacaat
aatccaatgttgctcaagttagcaaaacttaacttcaatataattcaagccacgcaccaa
aaagatctcaaagatgtaatcagatggtggaggaatctttccatagttgaagatttgtac
tttacaagggacaggatagtagaaagcttcttctacgctgtaggaattgcctctgagcct
caacatggaagcatgagaaaatggctcaccaaagtgattcaattaattttaattatagat
gatgtttatgatatttacggttcattagctgatgtgcagaaatttactcgtgccatagag
aagtgggatgcaaatgaagtacaactgttaccagagtgtatgcagatctgtttcagagca
ttggatgatacaatgcaagagatatcgtttgaaattcaagaacaaaagtgtggatcctca
gcattaccttatctgaaacaagtgtgggtcaacttctgtaaatcattgctggtggaagct
atgtggtaccgcaaaggccatataccaacacttgcagagtatcttgataatgggttgatc
tcatcctccggtccattgctctcctttcatgtgatgtttggtctgacaaatgaaataata
agtgaaaggcttgatttatgcgcaaatttccaagaaattgtttaccacacttcaattata
attcgactttgcaatgaccagggtacctcagcggcggaactagagagaggtgatgttgct
tcatcaattttatgttacatgcaagaggaaaatgtgtcagaggatgtagctagagagcat
atcgaaagcataatcttggattcctggaagaagatcaattaccattttagtacgctttct
acatcacataggaaacttgttaagcatgtaataaacgaggcacgaatggcctatgtcatg
taccaatttggggatggatttggggttcaagatggcaaaactcgggatgaggtcctgttc
aacttgtttgaacccattacataa
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