Lycium barbarum (goji berry): 132634883
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Entry
132634883 CDS
T09483
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03022
Basal transcription factors
lbb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132634883
09124 Replication and repair
03420 Nucleotide excision repair
132634883
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lbb01001
]
132634883
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbb03021
]
132634883
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132634883
03400 DNA repair and recombination proteins [BR:
lbb03400
]
132634883
Enzymes [BR:
lbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
132634883
2.7.11.23 [RNA-polymerase]-subunit kinase
132634883
Protein kinases [BR:
lbb01001
]
Serine/threonine kinases: CMGC group
CDK family
132634883
Transcription machinery [BR:
lbb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132634883
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
132634883
DNA repair and recombination proteins [BR:
lbb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132634883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
OAM_alpha
Motif
Other DBs
NCBI-GeneID:
132634883
NCBI-ProteinID:
XP_060206995
LinkDB
All DBs
Position
4:complement(3755390..3762885)
Genome browser
AA seq
416 aa
AA seq
DB search
MTEIDSLLTKKVADRYLKREVLGEGTYGVVYKAIDTKSGQVVAIKKIRLGKQKEGVNFTA
LREIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYIQ
MTLKGLAVCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARLFGSPDRRFTHQVFARWYR
APELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQWHD
MVYLPDYVEYQFVPGQPLKILFPTATEDCIDLLSKMFSYDPKTRISAEQALEHRYFSSGP
PPTEPAQLPRPPPKREPANPRVSDLNPHDGPVVLSPPRKSRRVMPNREGFEANVRPEKMD
DHGNEFRQAGERSEQVPMSLDFSVFGMKPPTRPTITSADRSHLKRKLDLEFQPEEE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaatagacagtttattgactaaaaaagtagcagatcgttacttaaaacgtgaa
gttcttggtgaaggtacttatggtgttgtttacaaagctattgatacgaagagcggccag
gttgttgctatcaagaaaattcgtcttggaaaacagaaggaaggggtgaattttactgcc
ctgagggaaatcaaactattgaaagagctgaaggatcctaacattattgaattgattgat
gccttccctcacaaaggaaacttgcatcttgtgtttgagttcatggagacagatcttgag
gccgtgattcgtgataggaatatctttctctcacctgcggatataaaatcttatattcag
atgacattgaaaggtcttgctgtttgtcacaagaaatgggtcttgcatagagatatgaaa
ccgaacaatttactgattggacctaatgggcagcttaaacttgctgattttggattagca
cgtctatttggtagccctgatagaagatttacacatcaggtttttgcccggtggtacaga
gcaccagagttattatttggcgcgaagcagtatggacctggagtagatgtttgggccgct
gcatgtatctttgctgagctcctcctgcggcgaccatttttacagggaaacagtgatatt
gatcagctggggaagatttttgcggcctttgggaccccaaagccttcacagtggcatgat
atggtctacttgccggattatgttgagtaccaatttgtccctggacaaccactcaaaata
ttgtttccaacggctactgaagattgcatagatcttctgtcaaagatgttttcatacgac
ccaaaaactagaatttcagcggagcaagcattggagcatcggtacttctcatcaggacct
ccacctacggagccagctcagcttccaagacctccccctaagcgggaacccgcaaatcct
agggtttcagatctcaatccacatgatggtcctgtggtattgtctccgccaagaaagtca
aggagagtgatgccaaatcgcgaaggatttgaggcgaatgtgcgtccagaaaagatggat
gaccatggaaatgaattccgacaagctggtgagaggagtgaacaggtacccatgtcactg
gatttctcagtctttgggatgaaaccacctactagaccgaccattaccagcgctgaccga
tcacatttaaagaggaagttagatcttgaattccaaccagaagaggaatga
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