Lycium barbarum (goji berry): 132636447
Help
Entry
132636447 CDS
T09483
Name
(RefSeq) LOW QUALITY PROTEIN: homogentisate 1,2-dioxygenase
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00350
Tyrosine metabolism
lbb01100
Metabolic pathways
Module
lbb_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
132636447
Enzymes [BR:
lbb01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
132636447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HgmA_N
HgmA_C
Motif
Other DBs
NCBI-GeneID:
132636447
NCBI-ProteinID:
XP_060209296
LinkDB
All DBs
Position
4:complement(129635859..129641207)
Genome browser
AA seq
482 aa
AA seq
DB search
MECKDSSKTSNIPSNLDYKTGFGNHFSSEAIAGALPQGQNSPLICPFGLYAEQISGTSFT
SPRKLNQRSWLYRIKPSVTHEPFRPRIPRHEKLVSEFNQSNSSATPTQLRWKPVEIPETP
TDFVDGLYTICGAGSSYLRHGFAIHMYTANKSMENSAFCNADGDFLIVPQKGRLWITTEC
GRLQVCLGEIVILPQGFRFAVDLPDGPSRGYVAEIFGTHLQLPDLGPIGANGLAAPRDFL
VPVAWYEDGSRPGYTIVQKYGGELFTAKQDFSPFNVVAWHGNYVPYKYDLNKFCPYNTVL
MDHSDPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGG
YEAKADGFLPGGASLHSCMTPHGPDTKTYEATIALGNEAGPHKIANTMAFMFESCLIPRV
CPWALESPFMDHDYYQCWIGLKSHFSGLSVNEDNHDLQNGXTYRKVKCSSFRLASVVPPK
VT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcaaagatagcagcaaaacttctaatattccttctaatttggactacaaaaca
ggatttggaaatcatttttcatctgaagctatagctggtgctttaccccaaggtcaaaat
agtccacttatttgcccttttggtctttatgctgaacagatctctggcacttcttttact
tcacctcgcaaacttaaccaacgcagttggttatatcgtattaagccatcggttacgcac
gaaccatttagaccaagaataccaagacatgaaaagcttgtgagtgaattcaaccaatca
aacagttctgctacaccaactcaactacggtggaagcctgtggagatcccagaaacaccg
actgattttgtcgacggtttgtacactatatgcggggctggcagctcatatctccgacat
ggttttgctattcacatgtatactgccaacaaatcaatggagaactctgccttctgtaat
gctgatggtgactttctgattgttcctcaaaaaggaaggttgtggattacaactgaatgc
ggaagattgcaagtttgtcttggtgaaatagtgattttgcctcaaggatttcggtttgct
gttgaccttccggacggaccttcacgtggttatgttgctgaaattttcggaactcatctt
caacttcctgatctggggccaataggcgcaaatggcctggctgctccgagggattttctt
gttcctgttgcctggtatgaagatgggtcccgtccaggttacactattgtgcagaagtat
ggaggtgaactcttcactgcgaagcaggacttctctccttttaatgtggtcgcttggcat
ggcaattatgttccttataagtatgatttaaacaagttctgcccttacaatactgtgttg
atggaccacagtgatccttcaataaacacagttttgacagcaccgacggataaacctggt
gtggcgttgctcgactttgtcatttttcctccccgttggttggttgcggaacacactttt
cgtcctccatattatcatcgcaattgtatgagcgaatttatgggtctaatctatggggga
tacgaggcaaaagctgatggatttctccctggcggggcgagccttcatagctgcatgact
cctcatggtcctgataccaaaacatatgaggctaccattgcacttggaaatgaagcgggt
ccacataaaatagctaataccatggcttttatgttcgagtcttgcttaataccccgagta
tgtccatgggcacttgaatctccatttatggatcacgactattaccagtgttggatcggt
ttgaagtctcacttctcaggactatctgtgaatgaagacaaccacgatttgcagaatgga
naaacctatagaaaggtgaaatgctcatcgttcaggctagcttctgtagttcctcctaaa
gtgacttag
DBGET
integrated database retrieval system
