Lycium barbarum (goji berry): 132636893
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Entry
132636893 CDS
T09483
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00906
Carotenoid biosynthesis
lbb01100
Metabolic pathways
lbb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
132636893
Enzymes [BR:
lbb01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
132636893
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
132636893
NCBI-ProteinID:
XP_060209948
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Position
4:146396411..146402838
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AA seq
523 aa
AA seq
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MECVGVQNFAAMAVFTCPRFKSLGRRRIMPRKKQNLWPINMQVKCSSSSGSVVVKEDFAD
EEDYIKGGGSQLVFVQMQQKKDMDQQSKLSDKLRQISAGKTVLDLVVIGCGPAGLALAAE
SAKLGLNVGLVGPDLPFTNNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDDDPILIGRAY
GRVSRHLLHEELLKRCVEAGVLYLNSKVDRIVEGTSGHSLVECEGDIVIPCRFVTVASGA
ASGKFLQYELGGPRVSVQTAYGVEVEVDNNPYDPSLMVFMDYRDYVTHDAQSLEAKYPTF
LYAMPMSPTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGVRIKEIYEEEWSYIPVGGS
LPNTEQKTLAFGAAASMVHPATGYSVVRSLSEAPKCASVLANILRQNNIKDMLTSPSTPS
ISTQAWNTLWPQERKRQRSFFLFGLALILQLDIEGIRSFFRAFFRVPKWMWQGFLGSSLS
SADLMLFAFYMFIIAPNDMRKGLIRHLLSDPTGATMIRTYLTF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgttggagttcaaaattttgctgcaatggcagtttttacgtgtccgagattc
aaatcattaggaagaaggagaattatgccaagaaaaaagcaaaatttatggcctataaat
atgcaagtgaagtgtagcagtagtagtggaagtgtagttgttaaagaagattttgctgat
gaagaggattatataaaaggtggtggttcacaacttgtttttgtacaaatgcagcagaaa
aaagacatggatcagcagtctaagctttctgataagttgcgacaaatatcagctggaaaa
actgtactggacttagtggttattggctgcggtcctgctggtcttgctcttgccgcggag
tcagctaaattagggttgaacgttgggctcgttgggcctgatcttcctttcacaaataac
tatggtgtttgggaggacgagttcaaagatcttgggctccaagcctgcattgaacatgtt
tggagggatacaattgtatatcttgacgatgatgatcctattcttattggccgtgcttat
ggaagagttagtcgccatttactgcacgaggagttactcaaaaggtgtgtggaggcaggt
gttttatatcttaactcgaaagtggataggattgttgagggcacaagtggccacagtctt
gtagagtgcgagggtgacattgtgattccatgcaggtttgtcactgtcgcgtctggagca
gcctcggggaaattcttgcaatatgagttgggaggtccaagagtttctgttcaaacagct
tatggagtggaggttgaggtcgataacaatccatatgaccccagcctgatggttttcatg
gattatagagactatgtcacacacgacgctcaatctttagaagctaaatatccaacattt
ctctatgccatgcccatgtctccaacacgagtctttttcgaggaaacttgtttggcttca
aaagatgcaatgccatttgatctgttaaagaaaaaactgatgttacgattgaacacacta
ggcgtaagaattaaagaaatttacgaggaggaatggtcttacataccggttggtggatcc
ttgccaaatacagaacaaaaaacacttgcatttggtgctgctgctagcatggttcatcca
gccacaggttattcagttgttagatcactgtccgaagctccaaaatgcgcctctgtactt
gcaaatattttacgacaaaataatatcaaggacatgcttaccagtccaagtactccaagt
atttcaactcaagcttggaacaccctttggccacaagaacgaaaacgacaaagatcattt
ttcctatttggattagcactcatattacagctggatattgagggaataaggtcatttttc
cgcgcattcttccgtgtgccaaaatggatgtggcagggatttcttggttcaagtctttcc
tcagcagacctcatgttatttgccttctacatgtttatcattgcaccaaatgacatgaga
aaaggcctaatcagacatcttttatctgatccaactggtgcaacaatgataagaacttat
cttacattttaa
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