Lycium barbarum (goji berry): 132641308
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Entry
132641308 CDS
T09483
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb00600
Sphingolipid metabolism
lbb01100
Metabolic pathways
Module
lbb_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
132641308
Enzymes [BR:
lbb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
132641308
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
132641308
NCBI-ProteinID:
XP_060214230
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Position
5:121210804..121219311
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AA seq
538 aa
AA seq
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MDFQIPPWLNQYRASANSYLLQFDPLTLLIAPFISLLLARILQSIFLVIHEKGLKATIIS
FVMSSIKLVPGVKKYIDAEKQKIVDQLQGSSNRDGWRTELPRSGLGDKVLVQMKHEKQKD
VTWQGKCSGTVYIGGNENEGHFSLINEACSMFAHTNPLHLSVFPSVVRFEAEVVAMTAAI
LGSKEKASGGQICGNMTSGGTESILLAVKSSRDYMQAKKGITKPEMIIPVSAHSAYDKAA
QYFKIKLWRVPVDKEFRADVKAIKQHINKNTIMIVGSAPGFPHGIIDPIEELGDLASSYG
ICFHVDLCLGGFVLPFARKLGYPVPPFDFTVQGVTSISVDVHKYGLAPKGTSVVLYRNRE
IRKHQFVAVSEWTGGLYVSPTIAGSRPGGLLAGAWAAMISLGFEGYLENTKEIMEASKRI
QKGIQDIPELFVIGRPDMSIIAFGSDVVDIFEVNDVLSSKGWHLNALQRPNSVHICVTLQ
HVPVVQIFLKDLIDSVQTVKQNPGPVNGGFAPIYGAAGKMPDRGMVQDLLVEFMDSTC
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggatttccaaattccaccatggttgaatcaatacagagcttcagcaaattcctattta
ttacaattcgacccattaactctacttattgctcctttcatctctctattattggctcga
attcttcaatccatcttccttgttattcacgaaaaaggactcaaagctaccattattagc
ttcgttatgagctccatcaagttagtgcctggtgttaaaaagtacattgacgctgagaag
cagaagatagtggatcagttgcaaggttctagtaatagagatggatggagaactgagttg
ccgaggtcaggcttaggagataaagtcctagtgcaaatgaaacatgagaaacaaaaagat
gtgacctggcagggcaaatgttcgggtaccgtctatattggcggaaatgagaatgagggg
catttttcattgataaacgaggcatgttccatgtttgcacatacaaatccactacatctg
agtgtgttcccaagtgttgttagatttgaagcagaagtggttgcgatgacagctgcaatt
cttggtagtaaggaaaaggcttctgggggacaaatttgtggaaatatgacatcaggggga
actgaaagtatactattagcagttaaatcatcacgcgactatatgcaagccaagaaagga
atcactaaaccagaaatgataataccagtttccgcacactcagcatatgacaaggctgca
caatatttcaagatcaagttgtggcgtgttcctgttgataaagaatttcgagcagatgtt
aaagctattaagcaacatattaacaaaaacactattatgattgttggatcggcacctggt
ttcccccatggcataattgatccaattgaggagcttggtgatttggcttctagctatgga
atttgtttccatgttgacctttgtcttgggggctttgtcttacctttcgctcgtaaactg
ggataccctgtacctccatttgatttcactgttcaaggagtaacctcaatctcagtggat
gtacacaagtatgggctggccccaaaaggaaccagtgtagttctgtacagaaatcgtgaa
atacggaagcatcaatttgttgctgtctctgagtggactggtgggctttacgtttctcca
acaattgctggaagcaggcctggaggtctgctagcaggggcttgggcagcaatgatatct
ttaggcttcgaaggatacttggaaaacaccaaggagatcatggaggcatcaaaaagaatt
cagaaagggatacaggacattccagaactgttcgtgattggaaggcctgatatgagcatt
attgcttttggatctgatgttgtagacatatttgaagtcaatgatgtactatcatcaaaa
ggctggcatttaaatgcattgcagagacctaatagtgttcatatttgtgtgacgcttcaa
catgtaccagtagtccagatttttctgaaggatctaatagattccgtgcagactgtgaaa
caaaatccaggtccagttaacggagggtttgctccaatatacggtgctgcagggaagatg
ccagatcggggtatggttcaagatctattggtcgaatttatggacagtacatgctag
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