Lycium barbarum (goji berry): 132642629
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Entry
132642629 CDS
T09483
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132642629
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lbb02000
]
132642629
04147 Exosome [BR:
lbb04147
]
132642629
04090 CD molecules [BR:
lbb04090
]
132642629
Enzymes [BR:
lbb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
132642629
Transporters [BR:
lbb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
132642629
Exosome [BR:
lbb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132642629
CD molecules [BR:
lbb04090
]
Proteins
132642629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
ABC_ATPase
AAA_21
Zeta_toxin
DUF87
AAA_22
AAA_16
AAA_15
AAA_30
nSTAND1
AAA_25
AAA_28
CrtO
Motif
Other DBs
NCBI-GeneID:
132642629
NCBI-ProteinID:
XP_060215703
LinkDB
All DBs
Position
5:complement(114531069..114540206)
Genome browser
AA seq
1245 aa
AA seq
DB search
MGKKGGLFRYADGVDKLLMFLGTLGCIGDGLMTPLNMFILSALIDDYGGAADDDASLTND
IVDKYSLRLLCVAIGVGISACIGGICWTRSAERQTSRIRIEYLKSVLRQEVSFFDNQNAS
STSFQVVSAISADAHSIQDAIAEKIPNCVAHLSTFIFGLILAFYLSWRLALASVPFSLGF
VIPGVAFGKLLMSQGMKMKDAYGVAGSVAEQVISSIRTVYSYVGENETVKRFSNSLEESF
SLGVKQGLTKGLLLGSMGMIYVSWAFQSWAGSVLVANRGESGGRVFISALCVVLGGLSCM
SALPNISFITEATIAAARIFELIDRVPQIDSEDGKGKVLAYVRGDIDFNEVTFSYPSRPD
IQVLQDFNLKVKAGRTVAIVGGSGSGKSTVISLLERFYDPINGDILLDGRKIKKLQLKWL
RSQTGLVNQEPVLFATSIKENILFGKEGASMEMVVEAAKAANAHDFATSLPDGYDTHVGQ
FGFQLSGGQKQRIAIARALIKDPKILLLDEATSALDAQSERIVQEALDQASQGRTTIIVA
HRLSTIRRADKIVVLESGRIVESGSHDDLMSKTDEEGGVYFKMVKLQQSTANGEGACSPY
LPKETRGYTRRNYNMPMSPYSPASPFSPAISVSYAPSIHTCSYYDSDNEYLETFSHPSPS
TWRLLQMNAPEWKIALLGCLGAITFGVLQPLYAFCLGSVVSAYTSNDIPKIKSEIKIYSI
VFLSIGLTSFIANLLQHYNFAKMGETLTKRVREQVLSNLLTFEVGWFDQDQNTSAAVCAR
LSTEARMVRSLVGDRMSLLIQVSASASVAFVLALIVAWRVAIVLISIQPLLIASFYSRSV
LMKRMSERSHNAQSEGSQLASEAVINHRTITAFSSQNRMLDLFAKTQKGPRKENIRQSLL
SGAGLFCSQFLTTAAIALTYWYGGRLMNKNLLSSKHLFQVFFLLMSTGKNIADTGSMTSD
LARGSSAVASVFAILDRKTEIEPENPEGLKITKVLKGKIELKNVFFNYPSRPDQAIFQGV
NLKIEAGKTVALVGQSGSGKSTMIGLIERFYDPIKGQVLIDDKDIKSYNLKSLRSQIALV
SQEPILFAGSISDNIIYGKEEATESEIKKAAIRANAHEFISAMKDGYETYCGERGVQLSG
GQRQRIALARAILKNPTILLLDEATSALDSISENLVQEALERMMISRTSVAVAHRLSTIQ
KADTIAMIKNGKVVEQGSHSQLLALGKNGSYYGLMKLQSGHSPYR
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaggaggtcttttcagatatgctgatggtgttgataagttgctgatgttt
cttggtactttaggatgcattggagatgggctcatgactccacttaatatgtttattctc
agtgcccttattgatgattatggaggtgctgctgatgatgatgcttctctcactaatgat
attgttgacaagtactcactcaggttgctgtgcgttgcaattggagttggtatatccgcc
tgcattgggggaatttgctggacaagaagtgcagagagacaaacatctcgcataaggatt
gagtatttaaaatcagtgcttaggcaagaagttagtttctttgacaaccaaaatgcttcc
tccactagttttcaagttgtttccgctatttcagctgatgctcattcaatccaagatgct
atcgcagagaagattccaaattgtgttgctcatctgtcaacgttcatatttggcctaatt
cttgctttctacctctcatggagactagcattggcttcagttccattctcacttggtttt
gttatacctggtgtagcatttgggaagcttcttatgagccagggaatgaagatgaaggat
gcctatggagttgcaggaagtgtagcagaacaagtaatttcatcgattcgaacagtttac
tcttatgttggggaaaatgaaacagtaaaaagattcagtaattctcttgaggaaagtttt
agtcttggtgtgaagcaagggcttactaagggattgttgttaggaagtatgggaatgata
tatgtgtcgtgggcatttcagtcttgggcagggagtgtccttgttgctaatagaggagaa
agtggtggccgtgttttcatatcagctctttgtgttgttcttggtggactgtcttgtatg
agtgcacttcctaatatctcattcatcactgaggcaacaattgctgctgcaagaattttc
gaactaatcgatcgtgttcctcaaatagattctgaagatgggaaagggaaagttctagcg
tatgtaagaggagatatcgactttaatgaggtaactttcagctatccgtcaagaccagat
atccaggttctccaagattttaatcttaaagtgaaagctggaaggacagtagcaattgtg
ggaggtagtggttctggaaagtccactgtcatttccttgctagaaagattttacgatcca
atcaatggagatattttgcttgatggacgtaaaataaagaaactgcagcttaaatggttg
agatctcagacggggcttgtaaatcaggagcctgttctatttgctacatccatcaaggaa
aatatactcttcggaaaagaaggagcttcaatggaaatggttgttgaagctgctaaagct
gcaaatgcacatgactttgcaacctctttacctgatggatatgatactcatgttggacaa
tttggttttcaattgtctggaggacagaagcaaaggattgctatagcaagggcattgatt
aaagacccgaaaattcttctacttgatgaagcaacaagcgcactggatgcacaatcagaa
agaattgttcaagaggccctagaccaagcttcacaaggaaggacaacgatcatcgttgcc
catcgcctcagtacaatacgcagggctgacaagattgttgtccttgagtcagggagaatt
gttgaatctggttctcatgatgatctaatgagtaagactgatgaagaaggtggagtttac
tttaagatggtcaaattgcagcaatcaacagcaaacggtgaaggggcatgtagtccgtat
cttcctaaagagacaagaggctacacaaggaggaattataatatgcctatgtcgccttat
agccctgcctctccttttagcccagcaataagtgtaagttatgctccctccattcataca
tgttcttattatgatagtgacaatgagtatttagagactttctctcatccaagtccctca
acatggcgtttgctccaaatgaatgcaccagagtggaagatagcgctgttgggatgttta
ggagctattacatttggtgtacttcaaccactttatgcattttgcttgggatcagttgta
tcagcatatacatcaaatgatattccaaagataaagtcagagatcaaaatttatagcata
gtctttttgagcataggtttgaccagtttcatcgctaatctactccaacattacaacttt
gctaaaatgggagagacattgacaaagagagtcagagaacaggtgctttcaaacttgttg
acatttgaagtgggctggtttgatcaagaccagaacacgagtgcagcagtttgtgcgagg
ctctccactgaagcccgtatggttcgatcgcttgttggtgatcgcatgtcattgctaata
caagtttccgccagtgcttcggttgcttttgtacttgcattgattgtcgcatggagagtt
gctattgtactaatatctatacaacctttactcatagcaagcttctattcgcgaagtgtt
ctgatgaaaagaatgtccgaaagatcccacaacgcacagagtgaaggaagtcagctagca
agtgaagcagtgatcaatcacaggactatcactgccttttcttctcaaaatagaatgttg
gacctctttgcaaaaactcagaaaggccccagaaaagaaaatattcgacaatcattactt
tctggtgctggcttgttttgctctcaatttctaaccacagctgccattgccttaacatat
tggtatgggggaagactaatgaacaaaaacttactcagttcaaagcacctgtttcaagtt
ttcttccttttgatgagtaccgggaaaaatatagctgatactggaagtatgacttctgat
ttggcaagaggtagcagtgcagttgcatcggtttttgctatcttagatcggaagactgaa
attgaacctgagaatcctgaagggcttaaaatcacaaaggtattaaaaggaaagatagag
ctgaagaatgtcttctttaattatccgtctaggcctgatcaagcaatcttccaaggcgtg
aatctgaaaattgaagcaggaaaaacagtagcacttgttgggcaaagcggttctggaaaa
tccaccatgattggtttgatagaaagattctatgatccaataaagggacaagttctaatt
gatgacaaagacatcaaaagctacaatttgaagagcttaagatcacagattgctctagtg
agtcaagaacctatcctttttgcgggatccattagcgacaatatcatttatgggaaagaa
gaagctacagaatccgaaatcaagaaagctgcaattcgtgctaatgctcatgaatttata
agtgctatgaaggatggctatgaaacttattgtggtgaaagaggagtccagctttcagga
gggcaaaggcaaagaatagcacttgcacgagcgatactaaagaatccaactatacttctc
ctagacgaggcgactagcgcacttgacagcatatctgagaatttggtacaagaagcattg
gagaggatgatgatcagtagaacaagtgtagctgtagctcatcgcttatcgacgatacag
aaagcagacaccatagccatgattaaaaatgggaaggttgtggaacaaggatcacattct
cagttgcttgcccttggaaaaaatggctcctattatggactgatgaagttgcaatctggc
cattctccttatagatga
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integrated database retrieval system
