KEGG   Lycium barbarum (goji berry): 132643105
Entry
132643105         CDS       T09483                                 
Name
(RefSeq) nuclear-pore anchor
  KO
K09291  nucleoprotein TPR
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132643105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbb03019]
    132643105
Messenger RNA biogenesis [BR:lbb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132643105
SSDB
Motif
Pfam: TPR_MLP1_2 ATG17_like MAP7
Other DBs
NCBI-GeneID: 132643105
NCBI-ProteinID: XP_060215888
LinkDB
Position
1:complement(148854751..148863971)
AA seq 2045 aa
MPLFISDEEYSRCSNDVVLVAEKADEFIRDLYNQLETVKAQADASSITAEQTCSVLEHKY
VSLSSEYSALQLQYSELKGSFDGRLDELSRVQAEKQQAYLQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSSIKSYLDKIVHLTDIAADREARVCDLETEVSRCQASCS
RLLQEKELVERHNAWLNDELTAKVNGLMELRKAHSELEADMSAKLADAERRFNECDRSLK
RKEERVRELELKFTSLEQDLLSSKDVAAVKEEQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALESHGNQIENDYKERLEKEVSAKKELEEEVACLKDKLAKSEAELKKGEDTLK
LLPLSYFTSESLPNSVEAGDMVEDDRMVVPNLPIGVSGTALAASLLREGWSLAKMYTKYQ
EAVDALRHEQLGRKQAQDVLERVLYEIEEKAGVILDERAEHERLEDAYSLLNEKLQHSLS
QQADLERNILELRADMRRRDRDYAVAQAEIVDLQEQVTVLLKECRDIQFRGGSVGPKSDD
SVVSSSLIMFGAESNADDVGRLLSYKDINGLVEQNVQLRGLVRRFTDQIENRESELKEKY
EKELQKHIDESKSQVNAVLERADEQAKMIESLHTSVAMYRKLCEEHTVVSPDTQSQKLAE
VERQEVMLIPDSSHEVLGRAQERAFERVKCLEEESSRLRSELISLRSEREKSALEAQFAR
DKLDRYMKDFELLREEHNAVITRNVEFSQLIVDYQKKLRESYESSNAAEDLSRKLKMEVS
ILKSEKELLINAEKRASDEVSNLSQRVHGLQAHLDTLQSTENVRDEARAAERKKQEEYIK
HIEKEWAEAKKQLQEERDNVGNLRRERDSALNNALRQIEEMRKELTSTSHSVAAAESRAV
VAEGRSADLEEKLKASQSKVSERADEGGPSSSTELSDNVHSAEEVKRLREEVEINKNHML
QYKSIAQANEEALKQMELAYENLKVEADRVKKSMEEEALSLRKHVNELESECNLKSIEAA
SATAGKEEAVIATLAEISSLKEDSSAKMSQISNLEAQITALKDDLDKEHQRWRAAQDNYE
RQVILQSETIQELTRTSQALAALQEESSELRKLSDILKTENNALKAKWEAELSALEVSKI
EAEKKYAEANEQNKILLDRLEGLHIKLAEKDRVSSGVSSGSTMAESDDGLMNVVNYLRRS
KEIAETEISLLRQERLRLQSQLENALRRAEVAEASLSSERENSRAQVLSEEGFKSLQLQV
RELNLLRESNLQLREENKHNVEECQKLRQAAQKMKTEVEDLQKLLNERQANVEACRKEIE
MQKLDKEQLERRVSELVERYKSFDLEEYARLKESASQMQVNLREKDAELEKIKKALSEQQ
NLVSSLDQDLTKSRTELSQRESRINEILQAEASVRSEVDKQRRFNAQLKKRADNLLKEKD
RADNLSKEKDDLARENQALSKQLEDAKQGKRTADAADEQALKDKEKEKNTRIQGLEKVIA
QERSKRSKIQKTISDSYGTVTQQRSKLLDELDKHKQALKMLTDEVEKIRQTKGSQTEGTS
VDQLLSGTHLEDFTAAYLQAVDEFERVARNALRASGAADTSAPDASVSGSVVPGPAATSP
PPASLLTSTPVVVKGEEERRLVLSKITSETRKTGRKLVRPRITKPEEPLADVEMQDTDES
SHSRKHVTPQNAENLDNATLPTQPPIRKRPPAASTSDLQEETPATGETCLDVAQPVLKKS
KHLEAPQEGSEDKSAGNVEISESLPTTEEHDAGDETQGLKEEASDIEKDETTLSGEQVEE
PPVVATNQAESQVDRTDVADDTFVRPNEVSTPDKESTFQVQQEREQLSMDEREEGELIAD
PEDIGDLDGGSNLSMGSPENLEPQTDNLAVTDEDSLLAPTDTGEIESSQLPDDDKNDEVD
ATEELAESSDKLNDGGDQVAAESDQAVDSVVTGEKPSSSPVHSSNSKEGGPVDSAASETE
EGKQVSPVNRSSRTINLNERARERASIRQAAMLSSTPTRGRGRVLRGRGGRSGRGGRGPI
SGPQG
NT seq 6138 nt   +upstreamnt  +downstreamnt
atgccgttatttatatcggacgaggaatactcacggtgttcaaacgacgtcgttttagta
gcggaaaaagcggatgagtttattcgcgatttgtacaatcaattggagactgtgaaagca
caagctgatgcttcatctattactgctgaacaaacttgttctgtgcttgaacacaagtac
gtttcgctttcttccgagtactctgcgcttcaattgcagtactctgaacttaagggttcc
tttgatggacgactagatgaactctcgagagtacaagctgagaaacagcaagcttacctc
caatctattggaaaggatggagatgtagaccggttatcaacagaggcttcagagctccgg
aaaaccaagagacagttgatggaattggtggagcagaaagacttggagatcagtgagaaa
aattccagtatcaaaagctatcttgataagatagttcacttgactgatattgctgcagat
agggaagcacgggtctgtgacttggagactgaagtatcacgctgtcaggcttcttgttcg
cggcttttacaggagaaggagcttgttgagaggcataatgcatggcttaatgatgagtta
acggcgaaggtcaatggtctcatggagctgcgtaaagctcattctgagcttgaggctgat
atgtctgccaaactagctgatgccgagagaagatttaatgaatgtgataggtctttgaag
agaaaagaggaacgagtgagagaactggagttaaagttcacttctctagagcaagattta
ttatcctccaaggatgtagcagctgtgaaagaggagcaaatgtctggtgagattgcaacg
ttaaacaagcttgtggaattgtacaaggagagctccgaggaatggtctaagaaggcagga
gaacttgaaggagtaattaaagctttggagagtcatggaaaccaaatagagaatgactat
aaagagaggctcgagaaagaagtatctgcaaagaaagaactagaggaggaggttgcatgt
ttgaaagataagcttgcgaaaagcgaagcggaattaaaaaagggagaagatacattaaaa
cttcttcctttgagttattttacgagtgaatcattgccaaactcagttgaagctggtgac
atggttgaggatgatcgcatggttgtacctaatctgcctattggtgtttcaggaaccgca
ttagcagcttcacttcttcgggagggttggagtctggccaagatgtacaccaagtatcag
gaagctgttgatgcactacgacatgaacaattgggaagaaaacaagctcaagatgtattg
gagcgagtactctatgaaatagaagagaaagctggagttatcttggatgagcgagctgaa
catgaaaggctggaagatgcttactctttgctaaatgaaaaactgcagcattctctctct
caacaagctgatttagagagaaacattctggaattaagggctgatatgagaaggcgtgac
cgtgattatgcagttgctcaggcggagatagttgacctccaagaacaggtgacggtgctt
ttaaaggaatgtcgtgatatacaattccgtggtggatcggtgggccctaaaagtgacgat
tccgtggtatcaagttctttaattatgtttggtgctgaatctaatgctgatgatgttgga
cggctgttgagctacaaggacataaatggtctggttgaacaaaatgtccagctgagaggc
ctagttcgcagatttactgaccagattgagaacagggagtcagagctgaaggaaaagtat
gagaaggagcttcagaagcatattgatgaatctaaatcccaggttaatgcagtactggaa
agagctgatgagcaggcaaagatgattgaatcactccatacatctgtggcaatgtacaga
aaactttgtgaagagcatacagttgtttctcctgatactcaatctcaaaagttagcagag
gttgagaggcaggaagtgatgcttatacctgattcttcacatgaagttttagggagagca
caagaacgggcttttgagcgtgtaaaatgtcttgaagaagaatcgtcaagattacggagc
gagctaatctctcttcgctcggagcgtgagaagtcagctctggaagcacagtttgcccga
gataaacttgacagatatatgaaagattttgagctcctcagagaggagcataatgctgtc
atcacgagaaatgttgagttctcacagttgatagttgactaccagaagaagctgcgagaa
agttatgagtcatcgaatgctgctgaagatctttctcgaaagctaaaaatggaggtgtct
attctaaagagtgaaaaagaattgctgataaatgctgaaaagagagcttctgatgaagta
agtaatttgtcacagagagtgcatggtttgcaggcccatttagatacactgcagagtact
gagaacgtccgcgatgaggcaagagctgctgagaggaaaaagcaagaagagtatattaaa
cacattgagaaagagtgggctgaagctaagaaacaattgcaagaagagcgtgataatgtt
gggaaccttaggcgtgagcgagatagtgctctgaacaatgcattgaggcaaatcgaagaa
atgagaaaggaactgaccagcacatcgcattctgtggctgctgctgaatctagagctgtt
gttgctgagggacgatctgctgatttagaggaaaaattgaaagcttcacaaagcaaggtt
tctgaaagagctgatgaaggtggtccctcctcttctactgagctttctgacaacgtgcac
tctgctgaagaagttaaaagactcagagaggaggtggagattaacaaaaatcacatgctg
caatataaaagcatagctcaggctaatgaagaagcgttgaagcagatggaattggcgtat
gagaacctcaaagtagaagctgatagagtgaaaaaatcaatggaagaggaagctttatcc
cttaggaaacatgttaatgagcttgagagtgaatgtaatttgaagtccattgaagcagct
tctgcaactgcaggaaaagaagaagctgtcattgctactttagccgaaatatccagtctg
aaagaagatagctctgctaagatgtcacaaatttctaatttggaggctcaaattactgct
ttgaaagatgatttggacaaagagcatcaaagatggcgtgctgctcaagataattatgag
agacaggtaatcctgcagtcagaaacaattcaagaactgactagaacgtctcaagctttg
gctgccttacaagaagaatcatctgagctccggaaattgtcagatattctaaaaaccgaa
aataatgcattgaaggccaaatgggaggcagaattgtcggcgttagaagtgtcaaaaatt
gaagcagaaaagaaatacgctgaggctaatgaacagaacaaaatattacttgaccggctt
gagggtttgcacattaaactggctgagaaggaccgtgtatcttcaggtgtatcttctgga
agcacaatggccgagagtgatgatgggttgatgaacgttgtgaattatctaagacggtct
aaggaaattgcagaaacagaaatttccttgctgagacaggaaagacttaggttgcaatca
cagctcgagaacgctctgaggagagcagaggtagcagaagcatcacttagttctgagcga
gagaattcgagagctcaggttttaagtgaagagggatttaaatcactgcagcttcaggtt
agagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaaacacaat
gttgaagaatgccaaaaacttcgccaagctgcccagaagatgaaaactgaagtagaagat
ctgcagaaacttctcaatgaaagacaagctaacgtggaagcttgtaggaaagaaattgaa
atgcagaagctggataaggagcagcttgagaggagggtcagtgagttggttgagaggtat
aaaagttttgacctagaagaatatgcaagactgaaagaatctgcttcacagatgcaggtg
aatctgagagaaaaggatgcagaattggagaaaattaagaaagcgttatctgagcagcag
aatctggtatctagcttagatcaagacctcacaaagagcagaacagaattgagtcagaga
gaatctagaatcaacgagattctgcaagctgaggcctcggtgagatccgaagttgataaa
cagagaaggttcaatgctcaattaaagaagagggcagacaacttattaaaggaaaaggat
agggcagacaacttgtcaaaggaaaaggacgatttggctagagagaatcaagctctatcc
aaacagttggaagatgctaaacaagggaaaagaactgctgatgctgcagatgaacaagcc
ttgaaagacaaagaaaaggagaaaaacaccagaatccaggggcttgagaaggtcatagcc
caagagagatcaaagcgttcgaagattcaaaagacaataagcgattcctatggaactgtg
actcagcaacggtccaagctattagatgaactggacaagcacaagcaggctctgaagatg
cttaccgatgaagttgagaagataaggcaaaccaaaggcagtcaaacagagggcacgtca
gtggatcaacttctttctgggactcacttagaggattttactgctgcatatcttcaggct
gtagatgagtttgaacgggttgcacgtaatgcgctcagggcttctggtgctgctgacact
tctgctccagatgcttctgtttctggctctgtcgttccaggtccagcagctacgtctccg
ccaccagctagcttgttgacttccactcctgtagtagtaaaaggagaagaagaaaggaga
cttgttttatcaaagataacatctgaaactcgtaaaacaggaaggaagttggttcgacct
cgcatcacaaagccagaagaacctttagctgatgtagagatgcaagatacggatgaatcc
agccacagtaggaagcatgtgacacctcaaaatgcagagaatctagataatgccacatta
ccaactcagccaccaattcgcaagcgcccacctgcagcatctacctcagacttacaagaa
gagactcctgccacgggtgaaacctgcttagatgtggctcaacccgtgcttaagaagtcc
aaacatcttgaggcacctcaagaaggcagtgaagacaaatctgctggtaatgtagaaatt
tcagaatctctgcctactacggaggaacatgatgctggagatgaaacccaaggtttgaaa
gaggaagccagtgatattgagaaggacgagacgacactttctggagagcaggttgaagag
ccaccagttgttgcaacaaatcaggctgagtcacaggttgatagaacagatgttgcagat
gatacttttgtgaggcctaatgaagtgtctaccccagataaagaatcaacatttcaggtg
caacaagagagagagcagctatcgatggatgaaagggaagagggagagctaattgctgat
cctgaagacatcggagatcttgatggaggtagcaatttatcaatgggaagcccagaaaat
ttggaacctcagactgataacttggctgttactgatgaagattccttgcttgctccaaca
gacaccggggagatagaatcttcccagctcccagatgatgataagaatgatgaagttgat
gcgacagaagagctagctgaaagttctgataagttgaatgatggtggtgaccaggttgct
gcagaaagtgatcaggcggtggatagtgttgttactggtgagaaaccatcaagcagtcca
gttcatagtagcaattcaaaagaagggggtccggttgacagtgctgcttctgaaacagaa
gaaggaaaacaggtttcacctgtcaataggagctcaagaaccataaatttgaatgagagg
gctagagaaagggcttccattaggcaggctgctatgctttcctctacgccgacaagaggc
cgtgggcgagttcttcggggtcgcggtgggcgcagtggtcgcggtggtcgcggtccgatc
tctggtccacagggttaa

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