Lycium barbarum (goji berry): 132643105
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Entry
132643105 CDS
T09483
Name
(RefSeq) nuclear-pore anchor
KO
K09291
nucleoprotein TPR
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132643105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbb03019
]
132643105
Messenger RNA biogenesis [BR:
lbb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132643105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ATG17_like
MAP7
Motif
Other DBs
NCBI-GeneID:
132643105
NCBI-ProteinID:
XP_060215888
LinkDB
All DBs
Position
1:complement(148854751..148863971)
Genome browser
AA seq
2045 aa
AA seq
DB search
MPLFISDEEYSRCSNDVVLVAEKADEFIRDLYNQLETVKAQADASSITAEQTCSVLEHKY
VSLSSEYSALQLQYSELKGSFDGRLDELSRVQAEKQQAYLQSIGKDGDVDRLSTEASELR
KTKRQLMELVEQKDLEISEKNSSIKSYLDKIVHLTDIAADREARVCDLETEVSRCQASCS
RLLQEKELVERHNAWLNDELTAKVNGLMELRKAHSELEADMSAKLADAERRFNECDRSLK
RKEERVRELELKFTSLEQDLLSSKDVAAVKEEQMSGEIATLNKLVELYKESSEEWSKKAG
ELEGVIKALESHGNQIENDYKERLEKEVSAKKELEEEVACLKDKLAKSEAELKKGEDTLK
LLPLSYFTSESLPNSVEAGDMVEDDRMVVPNLPIGVSGTALAASLLREGWSLAKMYTKYQ
EAVDALRHEQLGRKQAQDVLERVLYEIEEKAGVILDERAEHERLEDAYSLLNEKLQHSLS
QQADLERNILELRADMRRRDRDYAVAQAEIVDLQEQVTVLLKECRDIQFRGGSVGPKSDD
SVVSSSLIMFGAESNADDVGRLLSYKDINGLVEQNVQLRGLVRRFTDQIENRESELKEKY
EKELQKHIDESKSQVNAVLERADEQAKMIESLHTSVAMYRKLCEEHTVVSPDTQSQKLAE
VERQEVMLIPDSSHEVLGRAQERAFERVKCLEEESSRLRSELISLRSEREKSALEAQFAR
DKLDRYMKDFELLREEHNAVITRNVEFSQLIVDYQKKLRESYESSNAAEDLSRKLKMEVS
ILKSEKELLINAEKRASDEVSNLSQRVHGLQAHLDTLQSTENVRDEARAAERKKQEEYIK
HIEKEWAEAKKQLQEERDNVGNLRRERDSALNNALRQIEEMRKELTSTSHSVAAAESRAV
VAEGRSADLEEKLKASQSKVSERADEGGPSSSTELSDNVHSAEEVKRLREEVEINKNHML
QYKSIAQANEEALKQMELAYENLKVEADRVKKSMEEEALSLRKHVNELESECNLKSIEAA
SATAGKEEAVIATLAEISSLKEDSSAKMSQISNLEAQITALKDDLDKEHQRWRAAQDNYE
RQVILQSETIQELTRTSQALAALQEESSELRKLSDILKTENNALKAKWEAELSALEVSKI
EAEKKYAEANEQNKILLDRLEGLHIKLAEKDRVSSGVSSGSTMAESDDGLMNVVNYLRRS
KEIAETEISLLRQERLRLQSQLENALRRAEVAEASLSSERENSRAQVLSEEGFKSLQLQV
RELNLLRESNLQLREENKHNVEECQKLRQAAQKMKTEVEDLQKLLNERQANVEACRKEIE
MQKLDKEQLERRVSELVERYKSFDLEEYARLKESASQMQVNLREKDAELEKIKKALSEQQ
NLVSSLDQDLTKSRTELSQRESRINEILQAEASVRSEVDKQRRFNAQLKKRADNLLKEKD
RADNLSKEKDDLARENQALSKQLEDAKQGKRTADAADEQALKDKEKEKNTRIQGLEKVIA
QERSKRSKIQKTISDSYGTVTQQRSKLLDELDKHKQALKMLTDEVEKIRQTKGSQTEGTS
VDQLLSGTHLEDFTAAYLQAVDEFERVARNALRASGAADTSAPDASVSGSVVPGPAATSP
PPASLLTSTPVVVKGEEERRLVLSKITSETRKTGRKLVRPRITKPEEPLADVEMQDTDES
SHSRKHVTPQNAENLDNATLPTQPPIRKRPPAASTSDLQEETPATGETCLDVAQPVLKKS
KHLEAPQEGSEDKSAGNVEISESLPTTEEHDAGDETQGLKEEASDIEKDETTLSGEQVEE
PPVVATNQAESQVDRTDVADDTFVRPNEVSTPDKESTFQVQQEREQLSMDEREEGELIAD
PEDIGDLDGGSNLSMGSPENLEPQTDNLAVTDEDSLLAPTDTGEIESSQLPDDDKNDEVD
ATEELAESSDKLNDGGDQVAAESDQAVDSVVTGEKPSSSPVHSSNSKEGGPVDSAASETE
EGKQVSPVNRSSRTINLNERARERASIRQAAMLSSTPTRGRGRVLRGRGGRSGRGGRGPI
SGPQG
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgccgttatttatatcggacgaggaatactcacggtgttcaaacgacgtcgttttagta
gcggaaaaagcggatgagtttattcgcgatttgtacaatcaattggagactgtgaaagca
caagctgatgcttcatctattactgctgaacaaacttgttctgtgcttgaacacaagtac
gtttcgctttcttccgagtactctgcgcttcaattgcagtactctgaacttaagggttcc
tttgatggacgactagatgaactctcgagagtacaagctgagaaacagcaagcttacctc
caatctattggaaaggatggagatgtagaccggttatcaacagaggcttcagagctccgg
aaaaccaagagacagttgatggaattggtggagcagaaagacttggagatcagtgagaaa
aattccagtatcaaaagctatcttgataagatagttcacttgactgatattgctgcagat
agggaagcacgggtctgtgacttggagactgaagtatcacgctgtcaggcttcttgttcg
cggcttttacaggagaaggagcttgttgagaggcataatgcatggcttaatgatgagtta
acggcgaaggtcaatggtctcatggagctgcgtaaagctcattctgagcttgaggctgat
atgtctgccaaactagctgatgccgagagaagatttaatgaatgtgataggtctttgaag
agaaaagaggaacgagtgagagaactggagttaaagttcacttctctagagcaagattta
ttatcctccaaggatgtagcagctgtgaaagaggagcaaatgtctggtgagattgcaacg
ttaaacaagcttgtggaattgtacaaggagagctccgaggaatggtctaagaaggcagga
gaacttgaaggagtaattaaagctttggagagtcatggaaaccaaatagagaatgactat
aaagagaggctcgagaaagaagtatctgcaaagaaagaactagaggaggaggttgcatgt
ttgaaagataagcttgcgaaaagcgaagcggaattaaaaaagggagaagatacattaaaa
cttcttcctttgagttattttacgagtgaatcattgccaaactcagttgaagctggtgac
atggttgaggatgatcgcatggttgtacctaatctgcctattggtgtttcaggaaccgca
ttagcagcttcacttcttcgggagggttggagtctggccaagatgtacaccaagtatcag
gaagctgttgatgcactacgacatgaacaattgggaagaaaacaagctcaagatgtattg
gagcgagtactctatgaaatagaagagaaagctggagttatcttggatgagcgagctgaa
catgaaaggctggaagatgcttactctttgctaaatgaaaaactgcagcattctctctct
caacaagctgatttagagagaaacattctggaattaagggctgatatgagaaggcgtgac
cgtgattatgcagttgctcaggcggagatagttgacctccaagaacaggtgacggtgctt
ttaaaggaatgtcgtgatatacaattccgtggtggatcggtgggccctaaaagtgacgat
tccgtggtatcaagttctttaattatgtttggtgctgaatctaatgctgatgatgttgga
cggctgttgagctacaaggacataaatggtctggttgaacaaaatgtccagctgagaggc
ctagttcgcagatttactgaccagattgagaacagggagtcagagctgaaggaaaagtat
gagaaggagcttcagaagcatattgatgaatctaaatcccaggttaatgcagtactggaa
agagctgatgagcaggcaaagatgattgaatcactccatacatctgtggcaatgtacaga
aaactttgtgaagagcatacagttgtttctcctgatactcaatctcaaaagttagcagag
gttgagaggcaggaagtgatgcttatacctgattcttcacatgaagttttagggagagca
caagaacgggcttttgagcgtgtaaaatgtcttgaagaagaatcgtcaagattacggagc
gagctaatctctcttcgctcggagcgtgagaagtcagctctggaagcacagtttgcccga
gataaacttgacagatatatgaaagattttgagctcctcagagaggagcataatgctgtc
atcacgagaaatgttgagttctcacagttgatagttgactaccagaagaagctgcgagaa
agttatgagtcatcgaatgctgctgaagatctttctcgaaagctaaaaatggaggtgtct
attctaaagagtgaaaaagaattgctgataaatgctgaaaagagagcttctgatgaagta
agtaatttgtcacagagagtgcatggtttgcaggcccatttagatacactgcagagtact
gagaacgtccgcgatgaggcaagagctgctgagaggaaaaagcaagaagagtatattaaa
cacattgagaaagagtgggctgaagctaagaaacaattgcaagaagagcgtgataatgtt
gggaaccttaggcgtgagcgagatagtgctctgaacaatgcattgaggcaaatcgaagaa
atgagaaaggaactgaccagcacatcgcattctgtggctgctgctgaatctagagctgtt
gttgctgagggacgatctgctgatttagaggaaaaattgaaagcttcacaaagcaaggtt
tctgaaagagctgatgaaggtggtccctcctcttctactgagctttctgacaacgtgcac
tctgctgaagaagttaaaagactcagagaggaggtggagattaacaaaaatcacatgctg
caatataaaagcatagctcaggctaatgaagaagcgttgaagcagatggaattggcgtat
gagaacctcaaagtagaagctgatagagtgaaaaaatcaatggaagaggaagctttatcc
cttaggaaacatgttaatgagcttgagagtgaatgtaatttgaagtccattgaagcagct
tctgcaactgcaggaaaagaagaagctgtcattgctactttagccgaaatatccagtctg
aaagaagatagctctgctaagatgtcacaaatttctaatttggaggctcaaattactgct
ttgaaagatgatttggacaaagagcatcaaagatggcgtgctgctcaagataattatgag
agacaggtaatcctgcagtcagaaacaattcaagaactgactagaacgtctcaagctttg
gctgccttacaagaagaatcatctgagctccggaaattgtcagatattctaaaaaccgaa
aataatgcattgaaggccaaatgggaggcagaattgtcggcgttagaagtgtcaaaaatt
gaagcagaaaagaaatacgctgaggctaatgaacagaacaaaatattacttgaccggctt
gagggtttgcacattaaactggctgagaaggaccgtgtatcttcaggtgtatcttctgga
agcacaatggccgagagtgatgatgggttgatgaacgttgtgaattatctaagacggtct
aaggaaattgcagaaacagaaatttccttgctgagacaggaaagacttaggttgcaatca
cagctcgagaacgctctgaggagagcagaggtagcagaagcatcacttagttctgagcga
gagaattcgagagctcaggttttaagtgaagagggatttaaatcactgcagcttcaggtt
agagaactgaacttacttcgtgaaagtaacttgcaattgagagaggagaacaaacacaat
gttgaagaatgccaaaaacttcgccaagctgcccagaagatgaaaactgaagtagaagat
ctgcagaaacttctcaatgaaagacaagctaacgtggaagcttgtaggaaagaaattgaa
atgcagaagctggataaggagcagcttgagaggagggtcagtgagttggttgagaggtat
aaaagttttgacctagaagaatatgcaagactgaaagaatctgcttcacagatgcaggtg
aatctgagagaaaaggatgcagaattggagaaaattaagaaagcgttatctgagcagcag
aatctggtatctagcttagatcaagacctcacaaagagcagaacagaattgagtcagaga
gaatctagaatcaacgagattctgcaagctgaggcctcggtgagatccgaagttgataaa
cagagaaggttcaatgctcaattaaagaagagggcagacaacttattaaaggaaaaggat
agggcagacaacttgtcaaaggaaaaggacgatttggctagagagaatcaagctctatcc
aaacagttggaagatgctaaacaagggaaaagaactgctgatgctgcagatgaacaagcc
ttgaaagacaaagaaaaggagaaaaacaccagaatccaggggcttgagaaggtcatagcc
caagagagatcaaagcgttcgaagattcaaaagacaataagcgattcctatggaactgtg
actcagcaacggtccaagctattagatgaactggacaagcacaagcaggctctgaagatg
cttaccgatgaagttgagaagataaggcaaaccaaaggcagtcaaacagagggcacgtca
gtggatcaacttctttctgggactcacttagaggattttactgctgcatatcttcaggct
gtagatgagtttgaacgggttgcacgtaatgcgctcagggcttctggtgctgctgacact
tctgctccagatgcttctgtttctggctctgtcgttccaggtccagcagctacgtctccg
ccaccagctagcttgttgacttccactcctgtagtagtaaaaggagaagaagaaaggaga
cttgttttatcaaagataacatctgaaactcgtaaaacaggaaggaagttggttcgacct
cgcatcacaaagccagaagaacctttagctgatgtagagatgcaagatacggatgaatcc
agccacagtaggaagcatgtgacacctcaaaatgcagagaatctagataatgccacatta
ccaactcagccaccaattcgcaagcgcccacctgcagcatctacctcagacttacaagaa
gagactcctgccacgggtgaaacctgcttagatgtggctcaacccgtgcttaagaagtcc
aaacatcttgaggcacctcaagaaggcagtgaagacaaatctgctggtaatgtagaaatt
tcagaatctctgcctactacggaggaacatgatgctggagatgaaacccaaggtttgaaa
gaggaagccagtgatattgagaaggacgagacgacactttctggagagcaggttgaagag
ccaccagttgttgcaacaaatcaggctgagtcacaggttgatagaacagatgttgcagat
gatacttttgtgaggcctaatgaagtgtctaccccagataaagaatcaacatttcaggtg
caacaagagagagagcagctatcgatggatgaaagggaagagggagagctaattgctgat
cctgaagacatcggagatcttgatggaggtagcaatttatcaatgggaagcccagaaaat
ttggaacctcagactgataacttggctgttactgatgaagattccttgcttgctccaaca
gacaccggggagatagaatcttcccagctcccagatgatgataagaatgatgaagttgat
gcgacagaagagctagctgaaagttctgataagttgaatgatggtggtgaccaggttgct
gcagaaagtgatcaggcggtggatagtgttgttactggtgagaaaccatcaagcagtcca
gttcatagtagcaattcaaaagaagggggtccggttgacagtgctgcttctgaaacagaa
gaaggaaaacaggtttcacctgtcaataggagctcaagaaccataaatttgaatgagagg
gctagagaaagggcttccattaggcaggctgctatgctttcctctacgccgacaagaggc
cgtgggcgagttcttcggggtcgcggtgggcgcagtggtcgcggtggtcgcggtccgatc
tctggtccacagggttaa
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