KEGG   Laccaria bicolor: LACBIDRAFT_232470
Entry
LACBIDRAFT_232470 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
lbc  Laccaria bicolor
Pathway
lbc03020  RNA polymerase
lbc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LACBIDRAFT_232470
  09124 Replication and repair
   03420 Nucleotide excision repair
    LACBIDRAFT_232470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbc03021]
    LACBIDRAFT_232470
   03400 DNA repair and recombination proteins [BR:lbc03400]
    LACBIDRAFT_232470
Transcription machinery [BR:lbc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     LACBIDRAFT_232470
DNA repair and recombination proteins [BR:lbc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      LACBIDRAFT_232470
SSDB
Motif
Pfam: RNA_pol_L RNA_pol_A_bac RNA_pol_L_2 DUF22
Other DBs
NCBI-GeneID: 6073491
NCBI-ProteinID: XP_001877380
JGI: 232470
UniProt: B0D0L9
LinkDB
AA seq 304 aa
MQSHDDLEPTVRIRELKKDRVNFVLGNVDLAFANSLRRVMMADIPTVAIDMVEIEINTTV
LPDEFIAHRLGMVPLLSSNCDEAIRSTRDCTCLAGCSFCAIMLVLNVGCHDDTTMEVTSA
HLDVIPYPEENLDTSDSGEELSKRGEYFGHPVGKNEPGVAPILICKIRKGQELKVKCVAK
KGIAKEHAKWSPCSAVSFEYDPYNKLRHTTYWFETDERGEWPMSDNGKEEEPPRDDEPFD
FNAKPNKFYFEVETDGSLGPQEVVMKVLHKLRRTYSKFITTVGPSRTTDKVGQPHSRTQN
TARG
NT seq 915 nt   +upstreamnt  +downstreamnt
atgcaaagccatgacgacttggaaccgactgtacgaatccgcgaattgaaaaaggacagg
gtcaacttcgttttgggaaatgtggaccttgcgtttgcaaactcattgaggagagttatg
atggcagacattcccactgttgctattgacatggttgagatcgagatcaatacaaccgtg
cttcccgacgaatttatcgcgcaccgcctaggcatggtacctcttttgagctcgaattgc
gacgaagccatacgctccacgagagactgtacttgtctcgccggatgttcgttctgcgca
atcatgttggtcttgaatgtcggttgccacgatgacacgacaatggaagtgacgagcgcc
cacctcgatgtcattccttaccctgaagagaatcttgatacctcagattctggagaggaa
ttgtccaagagaggggagtattttggccaccctgttggaaaaaatgaacctggagttgcc
cccattttgatatgtaaaataagaaaagggcaggagctgaaagttaaatgcgtggcaaag
aagggtatcgcaaaggaacatgccaagtggtccccgtgttctgctgtatctttcgaatat
gatccatataataagctgcgacatacaacatattggttcgagaccgacgagagaggggag
tggcccatgagcgacaatgggaaagaagaagaaccaccgagagacgatgaacctttcgac
ttcaatgccaaacctaacaagttttactttgaggtcgagactgacggtagtctgggacca
caagaagttgttatgaaggtactccacaagcttcgtaggacttacagcaaatttatcact
actgtagggcctagcagaactacagacaaagttggccaacctcattctaggactcaaaac
acagccagaggttga

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