Laccaria bicolor: LACBIDRAFT_232470
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Entry
LACBIDRAFT_232470 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lbc
Laccaria bicolor
Pathway
lbc03020
RNA polymerase
lbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LACBIDRAFT_232470
09124 Replication and repair
03420 Nucleotide excision repair
LACBIDRAFT_232470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_232470
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_232470
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LACBIDRAFT_232470
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LACBIDRAFT_232470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
RNA_pol_L_2
DUF22
Motif
Other DBs
NCBI-GeneID:
6073491
NCBI-ProteinID:
XP_001877380
JGI:
232470
UniProt:
B0D0L9
LinkDB
All DBs
AA seq
304 aa
AA seq
DB search
MQSHDDLEPTVRIRELKKDRVNFVLGNVDLAFANSLRRVMMADIPTVAIDMVEIEINTTV
LPDEFIAHRLGMVPLLSSNCDEAIRSTRDCTCLAGCSFCAIMLVLNVGCHDDTTMEVTSA
HLDVIPYPEENLDTSDSGEELSKRGEYFGHPVGKNEPGVAPILICKIRKGQELKVKCVAK
KGIAKEHAKWSPCSAVSFEYDPYNKLRHTTYWFETDERGEWPMSDNGKEEEPPRDDEPFD
FNAKPNKFYFEVETDGSLGPQEVVMKVLHKLRRTYSKFITTVGPSRTTDKVGQPHSRTQN
TARG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccatgacgacttggaaccgactgtacgaatccgcgaattgaaaaaggacagg
gtcaacttcgttttgggaaatgtggaccttgcgtttgcaaactcattgaggagagttatg
atggcagacattcccactgttgctattgacatggttgagatcgagatcaatacaaccgtg
cttcccgacgaatttatcgcgcaccgcctaggcatggtacctcttttgagctcgaattgc
gacgaagccatacgctccacgagagactgtacttgtctcgccggatgttcgttctgcgca
atcatgttggtcttgaatgtcggttgccacgatgacacgacaatggaagtgacgagcgcc
cacctcgatgtcattccttaccctgaagagaatcttgatacctcagattctggagaggaa
ttgtccaagagaggggagtattttggccaccctgttggaaaaaatgaacctggagttgcc
cccattttgatatgtaaaataagaaaagggcaggagctgaaagttaaatgcgtggcaaag
aagggtatcgcaaaggaacatgccaagtggtccccgtgttctgctgtatctttcgaatat
gatccatataataagctgcgacatacaacatattggttcgagaccgacgagagaggggag
tggcccatgagcgacaatgggaaagaagaagaaccaccgagagacgatgaacctttcgac
ttcaatgccaaacctaacaagttttactttgaggtcgagactgacggtagtctgggacca
caagaagttgttatgaaggtactccacaagcttcgtaggacttacagcaaatttatcact
actgtagggcctagcagaactacagacaaagttggccaacctcattctaggactcaaaac
acagccagaggttga
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integrated database retrieval system