Laccaria bicolor: LACBIDRAFT_306082
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Entry
LACBIDRAFT_306082 CDS
T01044
Name
(RefSeq) C5-DNA-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lbc
Laccaria bicolor
Pathway
lbc00270
Cysteine and methionine metabolism
lbc01100
Metabolic pathways
Module
lbc_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LACBIDRAFT_306082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbc03000
]
LACBIDRAFT_306082
03032 DNA replication proteins [BR:
lbc03032
]
LACBIDRAFT_306082
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_306082
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lbc02048
]
LACBIDRAFT_306082
Enzymes [BR:
lbc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
LACBIDRAFT_306082
Transcription factors [BR:
lbc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
LACBIDRAFT_306082
DNA replication proteins [BR:
lbc03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
LACBIDRAFT_306082
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LACBIDRAFT_306082
Prokaryotic defense system [BR:
lbc02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
LACBIDRAFT_306082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
ERCC3_RAD25_C
DUF6103
Motif
Other DBs
NCBI-GeneID:
6070896
NCBI-ProteinID:
XP_001875435
JGI:
306082
UniProt:
B0CSP1
LinkDB
All DBs
AA seq
1309 aa
AA seq
DB search
MPPRLVPFVEIIIRPKGNKRSRSLTCPSPEPSTAPLPSPSRTSHKRRKDEQLAERLCDDE
VQSDPASRTLSPTVSTFDDDAPPALLNSPTVSEFDRLSPGITGIDEDEETGSKRSRVSSS
PHNYGGRTVEQEAETYQYEVEEDEIEEDGTIYVLGETPAGGDDDDIPVRLLTDFTIYDLS
TREVVCVGELQQLGFTKRQYGASGKIKPWFIHDGGDISDEDGDEFDEDLADGEDVLPADQ
TKLTKIIEFNVYDLSERRGNIDSKIYIRTSYAWYILGFPSATYEDFFTPFWIRHQLVYRL
ASEARKHIHMTYQSFIDTLGGVYTLDKHLPSASDLLGRDLTQSDLELPDIKAYIIAILLE
LQADFQITRVPLIRSILDGAVEDVGLSPTKKSRRRVMTKNRNQENEVLKHRETTFLTPIV
SQIAQHLFDGSLVASDPIEEMEVDNQSLKVHKTHHENPLKIVWGQALGQNVEFFENITVD
GVRYQVGDVVMVQPEGGERAKHSSSQSTVNQYGQNWWFCYITHFFEHQSQKGRTKMFHGQ
WFVHGSETVLQETAHSRALFLLNSCDSNPINAIYQKCNFRFLELGEQEPFDDFAVDANDF
HCSYLYDDDHAKFTHIPSDFLDNSHQSEPCFSCHEKQKEKNQQKLYLLENGFTQHGVNYH
IHDFTYIRPHGNVRVLNIAQITNTKKDGDDLRVSVQYLGRYKDDERHLYMTNKKEQISSD
MLEGVCYLQYLTNVEAIECWVSHDDHFYLNQEQDDHGNLSLLNPGKFRFCQICQDGQKQV
IKDGKGFSQQNSKLIGMELFSGAGGLGLGIDMSGFVETKYAVEFSPSAAKTYKCRETYFL
CIFYAYLFTRTNNPDVLVYNQDSSTLLQQALAKDNGKNPPPLLSKDGKTHCPEMPQKGCQ
VDFIFGGPPCQSFSLANHHRKKNDIRSTLPCSMLSYVEYYNPDYFLLENVRGLLSHTLQD
GRTNTVVQAGMVKFICRTSLALGYQIHYKLLQASHYGTPQGRSRVIFWGAKQGLVLPQFP
LPSHAFEGRLACPSLPTGGHIPPPSRSKISGDYHQYAPLKPILVDDAIGDLPPFEWTNPH
QVIPRTSSQKDKRRSLKTPIPQFDAVLLQGNKGTIFSNPGFPEGVPYMSGPQNRYQKWLR
QGMVDEESDTESEVQDHFTSRFSAFLIEASVTVPLRPYADHKALPTELQPTYAMAGRKQW
KHSFYGRMDGDGQFKCTMTRASPNLKNSWLLHPHQKRMISIRECARSQGFPDGFIFESSN
EHPQRVVADKMRQIGNAVAVPFALALGKELGTSLIQQWKEKQRVGSISL
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcgactagtcccattcgtcgaaattataatcagacccaaaggcaataaacga
tcccggtctttaacctgcccatccccagaacctagtacagcacctctaccaagtccaagt
cggacgtctcacaaaagaagaaaagatgagcaacttgctgagcgtctctgcgacgatgaa
gtgcagtcggatcctgcttctcgtacattgtctccaacagtatcgacgttcgatgatgat
gctcctccagctcttctaaattcaccgaccgtctctgagtttgacagactctcgccaggc
attacgggcatcgatgaggatgaagagactggcagtaagcgaagtcgtgtttcaagttcc
cctcataactacggaggacgaacggtggagcaggaggcagaaacctaccagtatgaagtt
gaagaggacgaaatagaggaggatggaaccatctacgttctaggagaaacacctgcaggg
ggcgacgatgatgacatccctgttcggttacttactgactttaccatctacgacctctcg
acgcgcgaagtcgtttgtgtcggagaacttcaacagctcgggttcaccaaaaggcaatat
ggggcctccgggaaaattaagccgtggtttatacacgatggcggtgacatctcagatgaa
gatggtgatgagtttgatgaagatcttgccgatggggaggatgttctacccgcagaccaa
accaagttgacaaagataatagaatttaatgtctatgacctctccgaaaggcgaggaaat
attgactccaaaatatacatccgtacatcatatgcctggtatattcttggctttccttcc
gcaacatacgaggacttttttactcctttttggatacgccaccaacttgtgtatcgtttg
gcgtcagaagccaggaaacatattcatatgacgtaccagtctttcattgatactcttggc
ggtgtttacactttggacaaacatctgcctagtgccagcgaccttcttggtcgagatctc
acacagagtgatctcgaattgccagatattaaagcatacattattgctatactcttggaa
cttcaggcagattttcagattactcgtgtccctttgatccgctccattcttgatggtgct
gtggaggatgtggggctctcccccacgaaaaaatcgaggcggagagtcatgacaaagaat
cgcaaccaggagaatgaagttttgaagcaccgagagacaacattcctaacacccattgtc
agtcaaattgcccagcatctgtttgatgggtcattggtggcatcggatcctatagaagaa
atggaggttgataatcaatcactgaaggtacacaagacccaccatgagaatcctctgaag
atagtgtggggtcaggccttgggtcagaatgtagagttttttgaaaacattactgtggat
ggtgttcggtatcaggttggtgatgttgtgatggtacaaccagagggtggggagagagca
aaacattcatcaagtcagtctacagttaaccaatatggacaaaactggtggttttgttac
ataactcatttctttgaacatcaaagccaaaagggaagaacaaaaatgtttcatggacag
tggtttgttcatggatcagaaacagttctccaagaaactgcccattccagagctctattc
ttattgaattcctgcgacagcaaccctatcaatgccatataccaaaaatgcaatttcagg
tttcttgagcttggggaacaagaaccttttgatgattttgcagttgatgcaaatgatttt
cattgcagctatctgtatgatgacgaccatgcaaaattcacccacataccatctgacttc
cttgataattcacatcagtctgaaccatgcttctcctgccacgagaagcaaaaagagaag
aatcagcaaaagctttatctcttggagaatgggtttacccagcatggggtcaactatcat
atccatgatttcacttatattcgacctcatggcaatgtcagagtgctaaatattgcccag
atcaccaataccaaaaaggatggggatgatctgagggtctcagtccaatatttgggaaga
tacaaggatgatgagcgccatttatacatgacaaataagaaagaacaaatctcttcagat
atgcttgaaggagtttgttatctgcaatatctgacaaatgtggaagccatcgaatgttgg
gtgtcacatgatgatcacttttatttgaatcaagaacaggatgaccatggaaacctttct
ttacttaacccaggaaagttcagattctgtcaaatctgtcaagatggtcagaagcaagtt
atcaaagatggcaagggcttttcccaacaaaatagcaaattgattggaatggagctattt
tctggtgctggtggtttaggcttggggatagacatgtctgggtttgttgaaaccaaatat
gctgttgaattttcaccttcagctgccaagacctacaagtgcagggagacatattttttg
tgcatcttttatgcttatctttttaccagaacaaacaatcctgatgtactggtttataac
caagattcaagcactcttctccagcaagcattagcaaaggataatggcaaaaatcctcct
ccgttactctcaaaggatggaaaaacccattgcccagagatgccacaaaaaggttgtcaa
gttgactttatttttggaggccctccatgtcagtcattcagtttggcaaatcatcatcgt
aagaagaacgatatccgatccacgctcccatgtagcatgctcagctatgtggagtattat
aaccctgattattttcttcttgagaatgtcagagggttgttaagccacacacttcaagat
ggccgaacaaatacagttgtgcaggcaggtatggtcaaattcatctgtcggacatcactt
gctttgggttaccaaattcactacaagttgcttcaagcatctcattatggtactccacag
ggtcgatctcgtgtaattttctggggtgccaaacaaggattagtccttcctcaattccca
ttaccttcccatgcatttgaaggtagattggcgtgtccctcacttccaactggaggccat
atacctcctccgagcagaagcaaaatctcaggtgattaccatcaatacgctccattgaag
ccaatattggtggatgatgcaatcggagacttgccaccctttgaatggaccaaccctcat
caggtgataccgagaaccagctcccaaaaggataaacggagatcactgaagacgcctatc
cctcaattcgatgctgtcttgcttcagggaaacaaaggcaccatattcagtaatcctggc
tttcccgagggtgttccatatatgtctggtcctcagaatcgatatcagaagtggctacgt
caaggaatggtagacgaagaatcagacactgaaagtgaggtgcaagaccactttactagc
cggttcagtgcttttttgattgaagcgtctgtcacggtaccactgcgcccctacgctgac
cataaagccctaccaaccgaactacagccaacgtatgcgatggctggacgaaagcaatgg
aagcattcattttatggaagaatggatggggatggtcaattcaaatgcaccatgacgagg
gcgtctccaaacttaaagaatagctggcttcttcatccacatcaaaagcggatgatcagc
attcgtgaatgcgcccggtcgcaaggctttccagatggtttcatcttcgagtcctccaat
gaacatcctcaaagggtcgttgctgataaaatgcgacaaattggcaatgctgttgctgtg
ccatttgccctggcactggggaaagagctcggcacatctctaatccagcagtggaaggaa
aagcagagggtaggcagcatttccttgtaa
DBGET
integrated database retrieval system
