Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1646
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Entry
LBUCD034_1646 CDS
T02244
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lbn
Lentilactobacillus buchneri subsp. silagei CD034
Pathway
lbn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBUCD034_1646 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbn03021
]
LBUCD034_1646 (rpoC)
03400 DNA repair and recombination proteins [BR:
lbn03400
]
LBUCD034_1646 (rpoC)
Transcription machinery [BR:
lbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LBUCD034_1646 (rpoC)
DNA repair and recombination proteins [BR:
lbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LBUCD034_1646 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Motif
Other DBs
NCBI-ProteinID:
AFS00662
UniProt:
J9W4U2
LinkDB
All DBs
Position
complement(1631622..1632239)
Genome browser
AA seq
205 aa
AA seq
DB search
MELEVFKGQNKNELSMIEVAHAILAQRGDTMPFADLANAVQAYLGDSNKEIRDRLSQFYT
DLNIDGSFISLGDNLWGLRTWYPYESIDEATVHTEEDEDRPKRKKRRKVNAFLADASDDD
DVIDYDDDDPEDQDDDDFDDDTDDDDDSDDESEDLGKYNKDLQDIDDDSDDEDLPDGIEG
QLNELNDDDDSLDDDDDDFNSKDDH
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
ttggagttagaagtctttaaaggccaaaacaaaaatgaactatcgatgattgaggtcgca
cacgcaatcttggcacaacgtggagacacaatgccatttgccgatttagccaatgcggtg
caggcttatttaggtgatagtaacaaagaaattcgtgatcgtttatcacaattttatacc
gatttgaacattgatggcagctttatctcacttggtgacaatctttggggcttacgaaca
tggtacccttatgaatcaattgatgaagcaactgtccatacagaagaagacgaggatcgt
cccaagcgaaagaagcgccgtaaggtgaatgcctttcttgccgacgcttcagatgatgac
gacgtgatcgattatgatgacgatgatcctgaagatcaggacgacgatgactttgatgac
gatactgatgatgacgacgattcagatgatgaatcagaagatcttggcaagtacaacaaa
gacttgcaggatattgacgatgactcagacgatgaggacttgccagatggcatcgaaggt
caacttaacgaattgaatgatgatgacgattcattggatgatgacgatgatgatttcaat
tcaaaagacgaccattaa
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