KEGG   Lonsdalea britannica: CKQ53_09580
Entry
CKQ53_09580       CDS       T05623                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lbq  Lonsdalea britannica
Pathway
lbq00740  Riboflavin metabolism
lbq01100  Metabolic pathways
lbq01110  Biosynthesis of secondary metabolites
lbq01240  Biosynthesis of cofactors
lbq02024  Quorum sensing
Module
lbq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:lbq00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CKQ53_09580 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CKQ53_09580 (ribD)
Enzymes [BR:lbq01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CKQ53_09580 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CKQ53_09580 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD CusB_dom_1
Other DBs
NCBI-ProteinID: AXW87208
UniProt: A0A1X3RYX6
LinkDB
Position
2101046..2102161
AA seq 371 aa
MTLPSDEFYMARALELARRGRFTTAPNPNVGCVIARDGEIVGEGYHQKAGGPHAEVHALS
MAGERARGATAYVTLEPCSHHGRTPPCADALIAAGVTRVVAAMQDPNPQVAGRGLTRLHQ
AGIDVSYGVMAAEAEQLNRGFLKRMRTGLPFVQLKMAASLDGRTAMASGESQWITSPQAR
QDVQRFRAESSAILSSSATVLADDPSLTVRWEEFDPEMQQAYPQDQLRQPVRVVVDSQER
VTFRHRLIQQPGSTWLARQKADAQAWPSSVEQLALPLQGEGVDLVALMMLLGKREINSVW
VEAGARLAGALLRANVVDEVLLYLAPKLLGEAARPLCVLPGLSLLSQAPEFSLAQVAQVG
PDLRLTLKPQS
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgacactaccgtcggatgaattttatatggctcgggcgctggaactggcgcgccggggg
cgtttcaccactgcgcccaatcccaacgtcggctgtgtgatcgcccgcgacggcgagatc
gttggtgaaggctatcatcagaaagcgggcggtccccatgcggaagtccacgccctgagc
atggccggtgagcgcgcgcgcggcgcgacggcttacgttacgctggagccctgtagtcat
cacggacgtacgccgccgtgcgcggatgccttgatcgccgctggcgtaacgcgggttgtc
gccgcgatgcaggatcccaatccacaggtcgccggacgagggctgacgcgactgcatcag
gccggtattgacgtcagctatggggtcatggcggcggaagccgagcagcttaatcgcggt
tttctcaaacgcatgcgtaccggattgccctttgtacagctcaaaatggcggcgtcactg
gatggccgcacggcgatggcttccggcgaaagccagtggattacgtcgccgcaggcgcgt
caggatgtacagcgttttcgcgccgaaagctctgccatcctgagcagcagcgcgacggtg
ctggcggacgatccttctctgaccgtacgctgggaagaattcgatcccgagatgcagcag
gcgtatccgcaggatcagctgcgtcagcccgtccgggtggtcgtcgacagtcaggaacgc
gtcaccttccgtcatcgtctgattcagcagccggggtcgacctggctggcgcgtcagaag
gccgatgcgcaggcatggccgtcatcggtagaacagctggcgctgccattgcagggcgaa
ggggttgatctggtggcgttaatgatgctgctgggcaaacgcgagattaactcggtgtgg
gtcgaagcgggcgcacggctggccggtgcgttgctgcgtgccaatgtggtggacgaagtg
ctgctctacctcgcgccgaagctgctgggcgaggccgcgcgtccgctctgcgtcttgccg
ggattgtctctgttgtcccaggcgcctgagttttcgctggcgcaggtggcgcaagtcggt
cccgatctgcgtctgacgcttaaaccgcagtcctga

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