Lachnospiraceae bacterium oral taxon 500: C3V36_08320
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Entry
C3V36_08320 CDS
T05749
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Pathway
lbw00190
Oxidative phosphorylation
lbw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
C3V36_08320
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3V36_08320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbw03019
]
C3V36_08320
Enzymes [BR:
lbw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
C3V36_08320
Messenger RNA biogenesis [BR:
lbw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C3V36_08320
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
FliD_C
Motif
Other DBs
NCBI-ProteinID:
AVM70486
UniProt:
A0A2R3N3M6
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All DBs
Position
1812336..1814462
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AA seq
708 aa
AA seq
DB search
MQKAGQAVDLSNPQYYENRELSWLEFNQRVLEEAENPENPLFERLKFLSIVSSNLDEFFM
VRVASLKEQVDAGYTKEDFAGFTPKGQLKAISVRTHVMVEEQVQHFKRGILPQLRKKKII
FHSELPKLTATQKSFVEQYFTNMLYPILTPMGVDSSRPFPLIMNKTLNIGVIVENKGREE
FATIQVPSIIDRLIKIPAAEDGYHEFVYLEDVITEYIDRLFVGRQVLACGQYRITRNSDL
LIDEEEAEDLLLEIEKSIQQRKWGQAIRLELKKDIDQRIVDHLQKSLEIHRKDVYAIDGP
LDFTFLMKFYGDECGADMKYSEFTPCQPWALKEDIFATIRERDLFLHHPFESFQPVVDFV
KTAAEDPRVLAIKQTLYRVSGKSPIIQALARAAQSGKQVTVLVELKARFDEENNIQWARS
LERAGCHVIYGLVGLKTHSKITLVVRQEEDGIRRYVHLGTGNYNDVTARFYTDMGLLTCN
ELIGADASAVFNTLSGYSEPPKLHKLTMAPTGLREKFYQLIRREAEHARQGRPAKMICKM
NSLCDLGIMKEIYQAAMAGVQVELIVRGICGLIPGIPGVSENISVRSIVGKYLEHSRIYY
FYNDGREEVYLSSADFMPRNLDRRVELLFPIEDEEIKQGLFRILEIVLKDTVKAKLKTLE
KQYRNIDRRGKEVLNSQAKFEELARGKSRQLAEKEHADIFIPITAQSE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagcaggacaagccgttgatttatcaaatccgcagtattatgaaaacagggag
ctgagctggctggagtttaaccaaagagtattggaggaagcggaaaatccggaaaatcct
ttatttgaaagattaaagttcctgtcgattgtcagttccaatttggacgagttttttatg
gttcgggttgcctcgctcaaagaacaggttgacgccggttatacgaaagaagattttgcc
ggttttacgccgaaaggtcagttaaaagcgatttcggtgcggacgcatgtgatggtggaa
gaacaggtgcagcattttaaaagaggaattttgccgcagctgcgcaaaaagaagattatt
tttcattcggagctgccaaaactgacggccacgcaaaaaagctttgttgagcagtatttt
accaatatgctatatccgattttaacaccgatgggcgttgattcttcgcggccttttccg
ctgattatgaataaaaccctgaatatcggggtgattgttgaaaataagggcagggaggag
tttgccaccattcaggtgccgtcgatcattgaccggctgattaagattccggcggcggag
gatggatatcatgaatttgtgtacctggaagatgttatcacggaatatatcgaccgcctg
tttgtcggccggcaggtgctggcctgcggacagtaccggattacgcgcaattctgacctc
ttgattgatgaagaagaagccgaagatttattgctggagattgaaaagtccattcagcag
cgaaaatgggggcaggcgatccggctggagctgaaaaaagatattgaccagcggattgtc
gatcatttgcagaaatccctggaaattcaccgcaaagatgtttatgccattgacgggccg
ctggactttacttttttgatgaagttttacggcgacgagtgcggcgctgatatgaaatat
tctgagtttacgccgtgtcagccgtgggcgctgaaagaggatatttttgcgaccataagg
gagcgcgatttgttcttgcaccatccgtttgaaagttttcagccggtggttgattttgtt
aagacggcggcagaggatccgcgggtgttggcgattaagcagacgctttaccgggtcagc
ggcaaatcgccgattattcaggcactggccagagccgctcaatccggcaagcaggtgacg
gtgcttgtcgaattaaaagccagatttgatgaggagaataatattcagtgggccagaagc
ttggaaagagcgggctgccatgttatttacggcttggttggtctgaaaacgcatagcaaa
attacgctggtcgtgcgccaggaggaggacgggatccgccgttatgttcacttaggcacc
ggcaattataacgatgtgacggcccggttttatactgacatgggcctgttgacttgcaat
gaattgattggggcggatgcctcggcagtctttaacacgctgtccggttattccgaaccg
ccgaagctccataagctgaccatggcgccgaccgggcttagggaaaagttttatcagctg
attcgccgggaagcggagcatgcccggcaggggcggccggccaaaatgatttgcaagatg
aactcgttgtgcgacctcggcatcatgaaggaaatctatcaggcggcgatggccggtgtt
caggttgagttgattgtccggggaatttgcggcctgattccggggattccgggcgtcagc
gaaaatatcagtgtccgttccattgtcggcaaatatttggagcacagccggatttattat
ttttataatgacggccgggaggaagtttatttgtcgagtgcggattttatgccgagaaac
ttagaccgccgggtggaacttctctttccgattgaagacgaagaaatcaagcaaggcctt
tttcggattttagagattgttttaaaggataccgttaaagccaagctgaaaaccttagaa
aagcaataccgcaatattgaccggcgcggcaaggaagttttgaactcacaggctaagttc
gaagaattagcccggggaaaaagcaggcagctggcggaaaaggagcatgccgatattttc
attccgattacggctcaaagcgaataa
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