Leishmania braziliensis: LBRM_16_1400
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Entry
LBRM_16_1400 CDS
T01113
Name
(RefSeq) putative DNA-directed rna polymerase I largest subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBRM_16_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbz03021
]
LBRM_16_1400
Enzymes [BR:
lbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBRM_16_1400
Transcription machinery [BR:
lbz03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LBRM_16_1400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Nop14
Motif
Other DBs
NCBI-GeneID:
5414264
NCBI-ProteinID:
XP_001563742
UniProt:
A4H8R3
A0A3P3Z2Q6
LinkDB
All DBs
Position
16:complement(544515..549959)
Genome browser
AA seq
1814 aa
AA seq
DB search
MSLTTAFPFHAYVGDLRTRTVHERKSGVSLSLMTSEDMARLALVEVRVRCGQEDRLAPWA
PAVRRDGTYATFYDTRMGNFDARTFPPQACSTCCNTLNSKYGNERCQGHYGYISMPRRYP
NDPNRSQERLSVINPHLTQEVEQLLQAECFFCHRFRVPEFDVIRYQQALRLVDCGLIGEA
LRFLDMVANARGQDMRSRRRRDANETVINDIPLMLDHIDMQLRRRGAAAPLPPGATAGKM
GARGDDRDTGAASVSAHVNGSGDGFLKPVLDVRNEICKQALRSFREFGNVCAHCQGISPR
ITTKNGHLFFYFNKKNADFNVANGGLTVTQLREWEEMNRRQGRSHTYFRTSWAREHIKQL
CQRESTILAALYPHLGEATLSMPYACSLPSMYYYKVFFVDKLLVPPLPLRLSSGVQVSES
GSIVPDAGTRALSDVLQFVEQIEAYYVLANNSTPEHNLVSTAQEIAQEHNLRNLQAKVAE
VYTNVLESFAKKEGLFRMHMMGKRVNQACRSVISPDYLLEPNEVLLPRPFARALTFPELV
CSYSPARMLFLKRCVMNGPDMYPGATHLEISLTSGETRFVDLHVPELIRRQHAMKYFAMA
QTGSLTVHRHILDGDHLIFNRQPTLHKVSMMAYRAKVLSGLKTLRFHYVNGSSYNADFDG
DEMNIHVVQSLEARAELECLMDANLNYLVPTSGKPIRGFIQDHVVAGVLLTLRDKFLPHH
TFVQFVYNGIAPYMQKHGNPLSPNATLTELIPMPAVLKPHPLWTGKQLISAIVRYVTGVV
ESRGGTRKSNGVSMHGTSLIQPNTYTTTDPHTGELVSASRKCMEDGHVQFFESELITGIL
CKNQLGSCNLSVVHVIHEIYGPHMVGVLFGALGRVLSMSLQREGFSIGMDDMILLQEERR
TALLRELDNAPLSLPDDEARVMPVIMGMATNLQKEFVPGRMLRPFPQNQLLTMTMSGAKG
SNTNAIQMSLGLGQQLFDGRRVKRMNSGKTLPSFFVAEKRARSLGYAIGRFTSGIRPAEY
TFHAMAGRDGLIDTAVKTSRSGHLQRCLVKGLESLVVQWDHSVRDANGSVIQFLYGGDGL
DPMRTSSLQAWEVVKDNCVDLGRKMNVSTGVMTGEEEAEAAALRNNHGSKRERAYETAAA
MRAAQRALLEAEAQRDPLPAHYKASLDTYLETKAQYPLFKKVSQVARWAKNGVLSEKLRE
KREESIRYYRDVMTELTTRRRVRAYCDAGEPVGLLAAQAAGEPSTQMTLNTFHSAGSTVT
HVTEGIPRLRELLIYASVQKVAIVVPVEKATETDEEAISRILQAGVATRLTDCMARVPVS
AAATAATDSGATTRAHTTPGYHYHVTRSAEGTQVTVALLFSKVLLVRKQHTMCMSRAEHL
QSFTQTLKSFARQVVTALRGRSKDEREGACGPMRGTTQDPSSQVDDSGAAAGGGGMSDND
DDIDEQSTQMNTPALGAALAPSATGSELGRDDLIPEGDNDGGSSASDEDDDEEVADAADG
SRHRKGGSGSGNSPLCKKSRAEEDDNEEEDEDGNGSLWKSSRNGGVNSEVAATASGTMSY
DCFPTICVMYGSKKYRVEIAPLLRTAATRDGVVALPEDFFIVNVSIQTSDQVVAVIPDVL
ESVLVRQTFPSWLTQFDAVSYTRKAEDPTCGEMVFQGPAATIRSVTAFLALFTVRARAIK
VKRARSTDIRDMCTSFGVESGYKALFDELEKLFKRYSVDYHHLTLIADAATHRGIWENYN
FTGVISHSASPLFQMTFASSKRFLHTALTRGISDELSSISSAIMVGERPRVGTALVKVGQ
DPQILRDVIEKNLA
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaccactgctttcccctttcatgcgtacgtgggagatctgcgcacgcgcacc
gtccatgagcgcaagagcggtgtttccctctccctcatgacctcggaggacatggcacgc
ctcgcattggtggaggtgcgcgtgcgctgtgggcaggaggatcgactggcgccgtgggct
ccggccgttcggcgggacggcacttacgccacgttctacgacacgcgcatgggcaacttt
gatgcccgcacgttccctccgcaggcgtgctcgacgtgctgcaatacgctcaactccaaa
tatggcaatgaacgctgccagggccactacgggtacatcagtatgccgcgtcgctaccca
aacgacccgaaccgctcacaggaacgccttagtgtcattaacccacacctcacccaggag
gtggagcagctgctgcaggccgaatgctttttctgccaccgcttccgcgtgcccgagttc
gacgtgatccgctaccagcaggcactgcgcctcgtcgactgcggattgatcggcgaggca
ctgcggttcctggacatggtggcaaacgcccgcggacaggacatgcgcagccgacgccgc
cgtgacgcgaacgagaccgtcatcaacgacattcctcttatgctggatcacatcgacatg
cagctgcgccgccgcggtgccgctgcaccacttccccctggggctacggcaggcaagatg
ggggcccgcggcgatgatagagacaccggtgcagctagcgtgtcggcgcacgtgaatggc
agcggtgacggcttcctcaagccggtcttggacgtccgcaacgagatctgcaagcaggca
ctgcgcagcttccgcgagtttggcaacgtctgcgcgcactgccagggcatctcacctcgc
atcacgacaaagaatggacacctcttcttctacttcaacaagaagaacgcggacttcaac
gtggcaaacggcgggctgacagtgacgcagctgcgggaatgggaagagatgaaccgtcgc
caggggcgcagtcatacgtacttccgcacatcgtgggcgcgagagcacatcaagcagctg
tgccagcgcgagtccaccattcttgcagccctctacccacacctcggtgaggccacccta
agcatgccgtacgcctgctcgctcccgtcaatgtactactacaaggtgttctttgtggac
aagctgctcgtgccgccgctgcccctgcgcctgtcttcgggcgtgcaggtctccgagtcc
ggcagcattgtccctgacgccggcacacgtgccctatctgatgtcctccagtttgtcgag
cagatcgaggcgtactacgtcctcgcaaacaactccaccccagagcacaacctcgtcagc
acagcacaagaaattgcacaggagcacaacctgcggaacttgcaggccaaggtggcggag
gtgtacaccaacgtgctggagagctttgcaaagaaggaaggcctgttccgcatgcacatg
atgggcaagcgggtgaaccaagcatgccgtagcgtcatctcacccgactacttgctggag
ccaaacgaggtgctactgccccgccccttcgcccgcgcgttgaccttcccggagctggtg
tgcagctactcaccagcgcgcatgctgttcctcaagcggtgcgtcatgaacggcccagat
atgtatccgggcgccactcacctggaaattagcctgacgagcggtgagacgcgcttcgtg
gacttgcacgtgccggagctgattcggcggcagcacgccatgaagtactttgcgatggca
cagaccggctccctcacggtccaccggcatatcctcgatggcgaccacctcatcttcaat
cgccagccgaccctgcacaaggtatccatgatggcatatcgtgccaaagtgctctccggc
ttgaagacactccgcttccactatgttaacggcagctcgtacaacgccgactttgacggg
gacgagatgaacattcacgtcgtgcagagcctcgaggcaagggcggagcttgagtgtctg
atggacgccaacctcaactacctcgtcccgacgtctggcaagccgatccgcggctttatc
caggaccacgtggtcgccggggtgctgctgaccctccgcgacaaattcctgccgcaccac
acatttgtgcagtttgtttacaacggcatcgcaccgtacatgcagaagcacggcaacccg
ctcagcccgaacgcaacgctgacagagctgattccgatgcccgcagtactgaagccgcat
cccttatggacggggaagcaactcatttctgcgattgtccgctacgtgactggcgtggtg
gaaagtcgtggcggcacgcgcaagagcaatggtgtcagcatgcacggcacctctctcatc
cagccgaacacctacaccaccacggacccccacaccggtgagctcgtttcggcctcgcgc
aagtgcatggaggatggccacgtgcagttttttgagagtgagctcatcaccggcatcctg
tgcaagaaccaacttggctcctgcaacctctccgtcgtgcacgtcattcacgaaatctac
gggccgcacatggttggcgtgctcttcggcgcgcttggtcgcgtgctgtctatgagcctg
cagcgcgaaggcttttccattggcatggatgacatgatcctcttgcaagaggagcggcgt
acggcgctgctgcgcgagctagacaatgcacccctcagcctccccgacgacgaggcgagg
gtgatgccggtaatcatggggatggcgacaaacctccagaaagaattcgtgccaggacgc
atgctgcggcctttcccgcaaaaccaactgctgaccatgaccatgtcgggtgcaaagggt
agcaacacgaatgcaattcagatgtcgctcggtcttggccagcaactcttcgacgggcgc
cgggtgaagcgcatgaactcgggcaagacattgccgtcgttctttgttgcggagaagcga
gctcgctcgctgggctacgcgattggccgctttacctccggcattcgaccagcagagtac
acctttcacgccatggccggtcgagatgggctcatcgacacggccgtcaagacctcccgc
tctggtcacctgcagcggtgcctagtcaagggtctggagagcctcgtcgtgcagtgggac
cactccgtgcgcgacgccaacggcagtgtgatacagttcctctacggtggtgacgggctc
gacccgatgcggacctcgtccctgcaggcgtgggaggttgtcaaggacaactgcgtcgac
ctcggtcgaaagatgaacgtgagcactggcgtgatgacgggcgaggaagaggccgaggcg
gcggcgttgcgcaacaaccatggcagcaagcgcgagcgcgcctacgagacggctgcggcg
atgcgtgcggcacagcgtgcattgctggaggcggaggcgcagcgcgacccactccctgcc
cactacaaggcgagtcttgacacgtacctggagaccaaggcgcagtacccgctcttcaag
aaggtgtcacaagtcgcacgatgggccaagaacggcgtcttgagcgagaagctgcgcgag
aagcgtgaggagagtatccggtactaccgcgacgtcatgacggagctaacgacgcggcgg
cgggtgcgggcctactgcgacgctggagagcccgtcggtctgctggcggctcaggccgct
ggagagccgtcaacgcagatgacgctcaacacgttccacagcgccgggtcaactgtgacg
cacgtgacggagggtattccgcgccttcgcgagctgctcatctacgcctctgtgcagaag
gtggcaattgtggtgccggtggagaaggcgacggagactgacgaggaggcgatctcgcgc
attctgcaggccggcgtagcgacacggctgacagactgtatggcccgcgtacctgtttct
gcggctgccaccgcggccacggacagcggtgccacgacgagggcgcacacgaccccaggg
taccactaccacgtcacccgcagcgccgagggcacgcaggtgacggttgccctcctcttc
tccaaggtgcttcttgtgcgaaagcagcacaccatgtgcatgtcgcgagccgagcacctt
cagtcttttacacagaccctgaagagctttgcccgacaagtagtgactgcactgcggggt
cgctcgaaggacgagcgcgagggcgcctgcggaccgatgcgtgggacgacgcaagaccca
tcttctcaggtggacgacagcggcgctgcagccggcggcggtggcatgagtgacaacgac
gacgacatcgacgagcagtccacgcagatgaacacgccggcgcttggggccgccttggcg
ccgtctgccactggcagtgagcttggtcgggatgacttgatcccagaaggggacaacgac
ggcggtagcagcgctagtgacgaggacgatgacgaggaggtggcggacgccgcggacggc
tcgcggcatcgcaagggcggcagcggcagcggcaacagtcccctgtgcaagaagtctcga
gcagaggaggacgacaacgaggaggaagacgaggacggcaacggatcgctctggaagagc
tccaggaacggcggcgtcaacagcgaggtggctgccacagcatccggcacgatgagctac
gactgctttcccacaatctgcgtcatgtacggcagcaagaagtaccgggtcgagatcgcg
ccgctgctgcggacagcggccacccgcgacggcgttgtggcgctgccggaagattttttc
atagtgaacgtgtcgatacagacatcagaccaggtggtcgccgtcatcccggatgtgctc
gagagtgtgctggtccgacagacgttcccttcgtggctcacgcagtttgacgccgtctcg
tacacgcgcaaggccgaggacccgacgtgtggcgagatggttttccagggccccgcggcg
accatccgcagcgtgacggcgttcctcgccctcttcaccgtccgcgcacgcgctatcaaa
gtgaagagggcgcggtccaccgacatccgcgacatgtgcacctcctttggcgtggaaagc
ggctacaaagctctcttcgatgagctggagaagcttttcaagcgctactccgtcgactac
caccacctcactctcatcgccgacgcagcgacgcaccgtggcatttgggaaaactacaat
tttaccggtgtcatctcccacagcgccagcccgctcttccagatgacattcgcgtcgtca
aagcgcttcctgcacacagccctgacgcgcggcatcagcgacgagttgagctccatcagc
tcggccatcatggttggtgagcggcctcgcgtcggaacagcacttgtcaaggtgggccag
gacccacagatcttgcgcgatgtcatcgagaagaaccttgcctga
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integrated database retrieval system
