Leishmania braziliensis: LBRM_31_2950
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Entry
LBRM_31_2950 CDS
T01113
Name
(RefSeq) RNA polymerase II largest subunit
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
lbz
Leishmania braziliensis
Pathway
lbz03020
RNA polymerase
lbz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LBRM_31_2950
09124 Replication and repair
03420 Nucleotide excision repair
LBRM_31_2950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbz03021
]
LBRM_31_2950
03400 DNA repair and recombination proteins [BR:
lbz03400
]
LBRM_31_2950
Enzymes [BR:
lbz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LBRM_31_2950
Transcription machinery [BR:
lbz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
LBRM_31_2950
DNA repair and recombination proteins [BR:
lbz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
LBRM_31_2950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_7
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
5418201
NCBI-ProteinID:
XP_001567286
UniProt:
A4HJP9
LinkDB
All DBs
Position
31:complement(1334420..1339408)
Genome browser
AA seq
1662 aa
AA seq
DB search
MSGGAPLPPSQMPLQKVHEVQFEVFKESQIKAYAKCIVEHAKSYEHGQPVRGGINDLRMG
TTDFEYSCETCGLKHPECPGHFGYVELAEPIFNINVFDIVLIALKCVCKYCGALLMDTND
PSELKKIAHLQGLNRLRMVAKLCGSVCKRSKDIQGCEGKGRQPRIGRFAGIYPGLQIKVT
QEEQDYVWHADNAWQVLDRVSDSDALIMGFDPRCCHPRDLILTVLPIPPPQVRPAVSFGS
AKSDDELTHQIMSIVKRNIQLRKDKESGVKAAVDRSRALLQEHVATFFNNASTFYKPAKV
GDTKKLKSLTERLKGKYGRLRGNLMGKRVDFSARTVITGDPNIDVDEVGVPFSVAMTLTF
PERVNVINKKRLTDFVQRVTYPSANYVIRPNGNVTKLALVKDRSAVNLDVGDVVERHIID
GDVVLFNRQPTLHRMSMMGHRVRVLNYNTFRLNLSCTTPYNADFDGDEMNLHVPQSLLTK
AELIEMMMVPKNFVSPNKSAPCMGIVQDSLLGSYRLTDKDTFVDKYFIQSVALWLDLWEL
PIPAILKPRPLWTGKQIFSLILPEVNHPASPYDKPPFPHNDKKIMIQRGQLLVGSITKGV
VGAAPGSLIHVIFNERGSDEVAKFINGVQRVTTYFNYCFAFSVGVQDTVADATTLKEMNN
VLHKTRQSVEKIGAAANNGKLTRKAGMSLLQSFEADVNSALNKCREEAAKKALSNVRRTN
SFKVMIEAGSKGSDLNICQIAVFVGQQNVAGSRIPFGFRRRTLPHFMLDDYGETSRGMAT
RGYVEGLQPHEFYFHTMAGREGLIDTAVKTSDTGYLQRKLVKALEDVHASYDGTVRNANQ
ELIQLVYGEDGLDGARIEGNQAFPIPHMTNCELVDKYRYEYNDEGSFSENMGGHYMDPFV
RDSLLRDPQSVLKLQEEFDQLVKDRAMSRLVIDMEDKNKLKMNLPVNVARLIQNARTTMG
KRSQVSNLNPITVINRVRELQEDLVQLFPSYHKDYNGRFVNVLSQQRVERALTLFGIHLR
QVLGSKRVLKEYKLNDKAFEYLLKEIRTKYQQSLITPGEIIGAIAAQSCGEPATQMTLNT
FHNAGISSKNVTLGVPRLLELLNVSKNQRNASVAVCLIREYQKRNKAQEAQQFIEYCTLA
NITTTVQIIYDPNPRNTVVAEDEEMIRWEQAVMNEEEEEQDVEQPPSPFIARLILDSDLF
NDKRLNMKDVKSAIRQVDDTYTVQANMENDGQRIVRLRPRKCTGADSVPALTKAVAQLLQ
SVHLRGIPGIKKTLLKEGNTFRVDPETGGMKNESSWMVDTEGTALQRIFVGVVNNEGKNI
IDFVKTSSNKIPEVVSVLGIEAARRKLLFELREAYLAYGLNINYRHYTILVDTMCQRGYL
MAVSRTGINRSETSGPLMRCSFEETVKVLMTAAAFGEKDPVRGVSANLVLGNQARIGTGL
FDLMLDMSKLQHVVPLDKATEARTSNVYHTDTSVAPGSSTLQGPYGELPPSTVHENSSLA
AGTSSVYPPHRGAGLYGGIPIEASAVQFSSILPTTMGAALVASNTSEYQSSHHLSGASTY
LASSALPSTSALDTELSSYHLQSAANSTAYGYAPMVAPRIPMPGGAQLPVGEGGSISYPY
EASNGDLFGSLGGAASSRASAPYDPTQQLSQEFSPTEEQEEQ
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggtgcacctctcccgccttcgcagatgccgctgcagaaggttcacgaagta
cagtttgaggtgttcaaggagtcgcagattaaggcctacgccaagtgcatcgttgagcat
gccaaatcctacgaacacggtcagccggtgcgtggtggcatcaacgacctgcgcatgggc
acaacagacttcgagtacagctgtgagacctgcgggctaaagcacccggaatgccctggt
cactttggctacgtggagctggccgagccgatctttaacatcaatgtattcgacatcgtg
ctgatagcccttaagtgtgtctgcaagtactgcggcgcgctgctgatggacacaaacgac
ccgtcagagctgaagaagattgcccacctgcagggcctcaaccgcctgcgcatggttgcc
aagctctgcggcagtgtgtgcaagcgcagcaaggacattcagggctgtgagggcaaggga
cgtcagccgcgcatcggccgctttgccggtatctacccgggcctgcagatcaaggttact
caggaggagcaggattatgtgtggcacgccgataacgcgtggcaggtgctggaccgtgtg
tcagacagcgacgccctaatcatgggcttcgacccgcgctgctgccacccgcgcgacttg
attctcacggtactgcccatccccccaccgcaagtccgccctgccgtctccttcggctca
gccaagtcggatgatgagctcacccaccaaatcatgtccattgtgaagcgcaacattcag
ctgcgcaaagacaaggagtccggcgtcaaggcagccgtggatcgctcgcgcgcgcttttg
caggagcacgttgctacgttcttcaacaacgcctccaccttttacaagcccgccaaggtg
ggtgacacgaagaagctcaagtctctcacggagcggctgaaggggaagtacggccggctg
cgtggcaatttgatgggcaaacgcgtcgacttctcggcccgtacagtcatcaccggcgac
cccaacatcgacgtcgacgaggtcggtgtgccgttctctgtcgccatgacgctgaccttc
ccggagcgggtaaacgtgatcaacaaaaagcgtctcacggattttgtgcagcgcgtcacg
tacccctcggccaactacgtcatccggccgaatggcaacgtgacaaagttggccctcgtg
aaggatcgcagtgccgtcaacctcgacgtcggcgacgttgtcgagcgccacatcatcgat
ggcgacgtcgtgcttttcaaccggcagccgacgctgcaccgcatgagtatgatggggcac
cgcgtccgcgtgctcaactacaacactttccgccttaacctgtcctgcacaacaccgtac
aacgccgactttgacggtgatgagatgaacctgcatgttccgcagtcgctcttgactaag
gcggagctgattgagatgatgatggtaccgaagaacttcgtgtcgccgaacaagtcagcg
ccgtgtatgggcatcgtgcaagacagcctgctcggcagctaccgtctcaccgacaaggac
acgtttgtcgacaagtacttcattcagagcgttgccctctggttggatctgtgggagctg
ccgatcccggccatcctgaagccgcgcccgctctggaccggaaagcagatcttctcgctg
atcctgccggaggttaaccaccccgcctcgccgtacgacaagccacccttcccgcacaac
gacaagaagatcatgatccaacgtgggcaactcctggtgggctccatcacgaagggcgtc
gtcggcgccgcgccggggtctcttattcacgtcatcttcaacgaacgcggctccgatgag
gtggccaagttcatcaacggcgtccagcgggtcacaacgtacttcaactactgctttgcc
ttctcggttggtgtgcaagacaccgtggctgatgcgacaacactcaaggagatgaacaat
gtactccacaagacccgccagtctgtcgagaagatcggcgccgcggcgaacaacggcaag
ctgacccgcaaggctggcatgtcgctgttgcagtccttcgaggcggatgtgaatagtgcc
ctgaacaagtgccgtgaggaggcggcgaagaaggcgctgagtaacgtgcgccgcacgaac
agctttaaggtgatgatcgaggccggcagcaaagggagtgacctaaatatttgccaaatc
gctgtgtttgtcggacagcaaaacgtcgcgggcagtcgcatccctttcggcttccgccgc
cgcacgctgccacacttcatgttggacgactacggtgagacctcgcggggcatggcgacg
cgcgggtacgtggagggactgcaaccgcacgagttttacttccacaccatggcagggcgt
gaagggcttatcgacacagccgtcaagacgtccgatacaggatacttgcagcgcaagctt
gtgaaggcgctggaggacgtgcacgcctcgtacgacggcacggtgcggaatgcgaaccag
gagctcatccagttggtgtacggcgaggacggcctggacggtgcccgcattgagggcaac
caggccttcccgatcccgcacatgaccaactgtgagcttgtcgacaagtaccgctacgag
tacaacgacgagggtagcttctcggagaacatgggcggccattacatggatccgtttgta
cgtgactcgctgctacgcgacccgcagagcgtgctgaagctgcaagaggagttcgaccaa
ctggtgaaggatcgcgcgatgtcgcgcctcgttatcgacatggaagacaagaacaagctc
aagatgaacctccccgtgaacgtagcgcggctcatccagaacgcgcgcacgacgatgggt
aagcgcagccaggtgtccaacctaaacccgatcactgtgatcaaccgcgtgcgggagctg
caggaggacctcgtgcagttgtttccctcttaccacaaagactacaacggtcgcttcgtt
aatgtgctgagccagcagcgtgtggagcgggccctgacgctcttcggcattcacctgcgc
caggtcctcggctcgaagcgggtgctgaaggagtacaagctgaacgacaaggcgttcgag
tacttgctaaaggaaatccgcaccaagtaccagcagtccctcatcacccctggtgagatc
atcggcgccattgccgcgcagtcgtgcggggagccagcgacgcagatgacactgaacacg
ttccacaatgctggcatttcatccaagaacgtgaccctcggcgtgccgcgactgctggag
ctgttgaatgtgagcaaaaaccagcgcaacgccagtgtggccgtctgtctaattcgagag
taccaaaaacgcaacaaagctcaggaggcacagcagttcattgagtactgtacgctggcg
aacatcacgacgacggtgcagatcatctatgaccccaacccccgcaacaccgtcgttgcc
gaggacgaggagatgatccggtgggagcaggcggtgatgaatgaggaagaagaggagcag
gatgtggagcagccaccgtcccccttcattgcacgacttatccttgacagcgacctcttc
aatgacaagcgacttaacatgaaagatgtgaagagcgcgatccggcaggtggacgacacc
tacacggtgcaggcgaacatggagaacgacgggcagcgcattgtgcggctgcgtccgcgc
aagtgtaccggggcagactccgtcccggcgctcacgaaggcggtcgcgcagctgctgcag
agcgttcacctacgcggtatccctggcatcaagaagacactgctgaaggagggcaacaca
ttccgcgttgaccccgagacgggtggaatgaagaacgagtcgagttggatggtggacacc
gagggcacggcgctgcagcgcatcttcgtcggcgtggtgaacaacgagggcaaaaacatc
attgattttgtcaagaccagcagcaacaaaatccctgaggtggtgtccgtgctgggcatc
gaggcggcgcggcgcaagttgctttttgagctgcgcgaggcgtatctcgcctatgggctg
aacatcaactatcgtcactacaccatcctcgttgacaccatgtgccagcgtggttacctg
atggccgttagccgtactgggattaaccgcagcgagacatctgggccgctgatgcggtgc
tccttcgaggaaacagtgaaggtgctcatgacagcggccgcgtttggtgagaaggatccg
gtacgcggcgtctctgcaaacctcgtgctcggcaaccaggcccgtatcggcactggcttg
tttgacctgatgctggacatgagcaagctgcagcatgtggtgccactcgataaggccact
gaggctcgaacctcgaacgtgtaccacaccgacacatctgtcgcaccaggctcctcgaca
ctgcaggggccttacggtgagctgccgccgtcaactgtgcacgagaacagctctcttgca
gccgggacgtcctccgtatacccaccccacaggggagctggcctgtacggcggcatcccg
atcgaggcgagcgcagtgcagtttagcagtatcctgccaacgacgatgggagctgccttg
gtcgcctcgaacacaagcgagtaccagagcagccaccatctgtctggtgcctcgacgtac
ttagcatcgtcggcgttgccaagcacgagcgcgcttgataccgaactgtcctcataccac
ctgcagtccgctgccaactctactgcttacggttacgcgcccatggtagcccctaggata
cccatgcctggtggtgctcaactacccgtcggtgagggtggcagcatttcatacccatac
gaggcgtcaaacggcgatctcttcggctccctcggcggcgcagccagctcacgggcgagt
gcaccctacgaccccactcagcagctgtctcaggagttctcacccaccgaggagcaggag
gagcagtga
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integrated database retrieval system
