Lysinibacillus capsici: ICJ70_20425
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Entry
ICJ70_20425 CDS
T08448
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lcap
Lysinibacillus capsici
Pathway
lcap00190
Oxidative phosphorylation
lcap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
ICJ70_20425
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ICJ70_20425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcap03019
]
ICJ70_20425
Enzymes [BR:
lcap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
ICJ70_20425
Messenger RNA biogenesis [BR:
lcap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ICJ70_20425
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
UNT54849
LinkDB
All DBs
Position
complement(4023859..4026015)
Genome browser
AA seq
718 aa
AA seq
DB search
MTTEVTKNELHGEEFSENYNLLLEEIAKPQYYNNRELSWLAFNERVLEEAEDINNPLLER
LKFLAIFSSNLDEFFMVRVAGLQDQVRAGFHKPENKSGLTPKEQLAKIAERTQALVRRQT
EVYRHLIYDLLPQHNVHIADMKDLNSKQKSFINEMFAETIFPVLTPVAVDAYRPFPTLLG
KTLNLLVLLEQDESDLESRERVAIVQVPSVLDRYIKVPSEEGKTVVVLLEDVIVAHIEKL
FYGYSVKSAQAFRLTRNADLTIHEEGARDLLVEIEKELKKRKWGVGSRLEVRVGEMNEEV
LQYLLDEFEIEESDVFHIDGPLDLTFMFSFVKGISVGREHLEYESFIPQPPLDLQSDENI
FEKALQQDIFFHHPYESFAPIVDFISEAAVNPNVLAIKQTLYRVSGNSPIIQALKLAAEN
GKQVTVLVELKARFDEENNVHWAKQLEQAGCLVIYGMNNLKTHSKITLVVSRRNGKIERF
VHLGTGNYNDATAKIYTDMGIITTDKEFGIDATNFFNYLSGYTEKPTFNHLVVAPFDIRD
EFIRLMDEEIACHKKYGNGFIRAKMNSLTDKDLMMKLYEASIAGVKVELIIRGICCIRPG
IPGISENITVTSIVGRFLEHSRIYWFHHNGENKVYLSSADMMTRNMIKRVEILFPVYASE
AKTRIIDIMNAQLMDTAKARIQDSNGKYHYKEFDRSEDPLNSQEIFLKDALKPTLDEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaagtaacgaaaaacgagctacatggggaagaattttccgaaaactacaat
ctattgttagaggaaattgcaaagcctcaatattataataatcgcgaattaagctggctt
gcctttaatgagcgagtgctagaggaagcagaggatattaataatcctctgcttgaacgt
ttaaaatttttagctatatttagttccaatttagatgaatttttcatggtacgtgttgca
ggcttacaggaccaggttcgtgctggttttcataagcccgaaaacaaatctggcttaacg
ccgaaggaacagttggccaaaatagcagaacgcacacaagcattagtgcgtcgacaaact
gaggtatatagacatttaatctatgatttactgcctcaacataatgtacatattgcggac
atgaaagatttaaatagcaagcaaaaatcatttatcaatgaaatgtttgcagaaactatc
ttccctgttttaacacctgttgcagtggatgcgtatcgtcctttcccaactttgcttggt
aaaactttgaatttactagtgctgttagaacaggatgagtcagatcttgaaagtcgtgaa
agagtggcgattgtccaggttccatctgtgctagatcgctatataaaagtaccgtccgaa
gaaggaaagacagttgtagttttattggaggatgtgatagtagcacatattgaaaagctg
ttttatggctatagcgtaaaatcagcacaagccttccgcttaacaagaaatgcagattta
actatccatgaagaaggggctcgagatcttctcgtggagatcgaaaaagagctgaaaaag
cgaaagtggggagtaggaagccgtttagaagttcgagtgggagaaatgaacgaggaagtg
ctgcaatacttactagatgaattcgaaatagaagaatccgatgtattccatattgatggt
cctttggatttaacgtttatgttctcttttgtgaaaggtatttcagtaggtcgtgagcat
ttagaatatgaaagctttatcccacagccacctttagatttacagtctgacgaaaatatt
ttcgaaaaagcacttcaacaggatatatttttccatcatccatatgaatcttttgcccct
attgttgattttatttctgaggccgctgtcaacccgaatgtgttggctataaaacagaca
ttatatcgagtaagcgggaattcccctattattcaagcgttaaaacttgccgctgaaaac
ggtaaacaagtaacggtattagtggaactaaaggcacgtttcgatgaagaaaataatgta
cactgggcaaaacaattagaacaagcaggttgtcttgtaatttatgggatgaataattta
aaaacacactcaaaaattacgctagtcgttagtcgtcgtaacggcaaaatagaacgtttt
gtccatttgggtaccggaaattataatgatgctactgcaaaaatttatacggatatgggc
ataataacgacagataaagagtttggcattgatgcgacaaatttctttaactacttaagt
ggctatacagaaaaacctacctttaatcatttagtcgttgcaccatttgatatacgagat
gagtttattcgtttaatggatgaggaaattgcctgtcataaaaaatatggaaatggtttt
atccgtgcaaaaatgaattcattgacagacaaagatttaatgatgaagctttatgaggca
tccattgcgggtgtaaaggtcgaacttattattcgtggtatatgctgtattagaccagga
atcccaggtattagtgaaaacattaccgtaacaagtattgttggtcgtttccttgaacac
tctcgtatttattggttccatcataatggggaaaataaagtttatttatcctctgcagat
atgatgacacgtaatatgattaaacgtgtagaaattttattccctgtatatgcaagtgaa
gcaaaaactcgtattattgacataatgaatgcacaattaatggatactgcgaaagcccgt
attcaagactctaatggtaagtatcattataaagagtttgatcgtagcgaagatccatta
aatagccaggaaattttcttgaaggatgcattaaagcctacgctagacgaagaatag
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