KEGG   Lactococcus carnosus: BHS00_02400
Entry
BHS00_02400       CDS       T07226                                 
Name
(GenBank) DNA-directed RNA polymerase subunit delta
  KO
K03048  DNA-directed RNA polymerase subunit delta
Organism
lcar  Lactococcus carnosus
Pathway
lcar03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lcar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BHS00_02400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcar03021]
    BHS00_02400
   03400 DNA repair and recombination proteins [BR:lcar03400]
    BHS00_02400
Transcription machinery [BR:lcar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BHS00_02400
DNA repair and recombination proteins [BR:lcar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BHS00_02400
SSDB
Motif
Pfam: HARE-HTH LPG_synthase_C
Other DBs
NCBI-ProteinID: QDJ25500
LinkDB
Position
481432..481974
AA seq 180 aa
MKIKAFAKQDLSELSMIEVAHAMLEEKGKEIEFNVLVNDIQDYLEKSDSEIRDRLSRFYT
ELNTDGSFIPLGNNVWALRSWYAIDEIDEEVVALDELDDEGERPTKKRKKVNAFAADGVD
IDYSDDDPEDDDNIDEADVTYEDENPDDEKDEAEAFDTELEEVDLEDVAVEDLDDDDDEV
NT seq 543 nt   +upstreamnt  +downstreamnt
ttgaaaattaaagcatttgcaaagcaagatttatcagaactttctatgattgaagtggca
catgccatgttagaagaaaaaggcaaggaaattgagtttaacgtccttgttaacgatatc
caggattatcttgaaaaatcagatagtgagattcgtgatcgcttatcacgcttctataca
gaactgaatacagatggtagttttattcctctaggtaataatgtctgggctttacgctca
tggtatgcgattgatgaaatcgatgaggaagttgtcgcacttgacgaactagatgatgag
ggcgaacgtccgactaaaaaacgtaaaaaagtgaatgcttttgcagctgatggagtcgac
atcgattatagcgacgatgatccagaagacgatgataatatcgatgaagctgatgtgaca
tatgaggatgaaaatccggatgacgaaaaagatgaagcagaagcatttgatacggaactt
gaagaagttgatttagaagatgtcgctgttgaagatcttgacgatgatgatgacgaagtt
taa

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