Lemur catta (Ring-tailed lemur): 123620239
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Entry
123620239 CDS
T08326
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04721
Synaptic vesicle cycle
lcat04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
123620239 (SLC6A4)
04721 Synaptic vesicle cycle
123620239 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcat02000
]
123620239 (SLC6A4)
Transporters [BR:
lcat02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123620239 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
123620239
NCBI-ProteinID:
XP_045381245
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Position
15:18061689..18086911
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AA seq
630 aa
AA seq
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METTPLNSQKEVSACKDGEDCQENGVLQKGVPAPGDKAESGQISNGYSAVPSPGAGDDMQ
HSIPAATTTLVAEVHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYTICIIAFYIASYYNTIM
AWALYYLFSSFTDQLPWTSCKNSWNTGNCTNYFSEGNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLAVVITCFFGSLIT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPVFLLFILCSFLMSPPQLRLFHYNYPHWTVILGYCIGTSSFICIPTYITYRLIIT
PGTFKERIIKSITPETPTEIPCGDIRLNVV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacgcccttaaattctcagaaggaggtctcagcctgtaaggacggagaagat
tgtcaggaaaacggagttctacagaagggtgtccctgccccaggagataaagcagagtcc
ggccaaatatccaatgggtactcagcggttccgagccctggtgcaggggatgacatgcag
cactccatcccggctgccaccaccaccctagtggctgaggtccaccaaggagagcgggag
acctggggcaaaaaggtggatttcctcctttcagtcattggctacgctgtggacctgggc
aacgtctggcgctttccctacatatgttaccagaacggagggggggcgttcctcctcccc
tacaccatcatggccatttttggggggatcccgctcttttacatggagcttgcgctgggg
cagtaccatcgaaatggatgcatttcaatttggaggaaaatctgcccaatttttaaaggg
atcggctataccatttgcatcattgccttttacattgcctcctactacaacaccatcatg
gcctgggcactgtactacctcttctcctccttcacggaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctctgagggcaacatcacctgg
acactccattccacgtcccctgctgaagagttttacacgcgccatgtcctgcagatccac
cggtccaagggactccaggacctggggggcatcagctggcagcttgccctctgcatcatg
ctgatcttcactattatctacttcagcatctggaaaggtgtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccttacatcatcctttctgtcctgctggtgaggggggcc
accctaccgggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtatgggtggacgctgctgctcagatcttcttctctcttggtccgggc
tttggggtcctactggcttttgctagctacaacaaattccacaacaactgttaccaagat
gccctggtgaccagtgtggtgaactgcatgacaagcttcgtttcgggatttgtcatcttc
acggtgctggggtacatggctgagatgaggaacgaagatgtgtctgaggtggccaaagat
gcaggccccagcctcctcttcatcacatatgcggaagctatagccaacatgccagcatcc
acgttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacattt
gcaggcttagagggcgtgatcacggctgtgttggatgaattcccacatatctgggccaaa
cgccgggagtggtttgtactcgctgtggtcattacctgcttcttcggatccctgatcacc
ctgacttttggcggggcctacgtggtgaagctgctggaggagtatgccacagggcctgcc
gtgcttactgtcgtacttatagaagccgttgctgtgtcttggttctatggcatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgc
tgggtagccatcagccctgtgtttctcctgttcatcctttgcagttttttgatgagccca
ccacagctacgacttttccattacaattatccccactggactgtcatcctggggtactgc
ataggaacttcatctttcatctgtatccccacatacataacttatcggctgatcatcact
ccagggacatttaaggagcgcattatcaaaagtatcactccagaaacaccaacagaaatt
ccgtgtggggacatccgcttgaatgttgtgtaa
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