Lates calcarifer (barramundi perch): 108872827
Help
Entry
108872827 CDS
T04895
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108872827
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108872827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
108872827
NCBI-ProteinID:
XP_018516226
UniProt:
A0A4W6G141
LinkDB
All DBs
Position
LG1:5385382..5421973
Genome browser
AA seq
970 aa
AA seq
DB search
MYAGRKRRKPVQRAVKQSTAEGAKSNPSKRHRDRLNGELERLASLLPFPEEVTASLDKLS
ILRLSVSYLRAKNFFSVALNNRNGVTPDCANDDDSKTAGVVESKIPEGELLLQALNGFVL
VITASGTIFYSSHTIQDYLGFHQTDVMHQSVYELVHTEDQQELRRNLHWALNPPPATASN
NTQDSPQEIEPDSSSSLVTYNPEQLPPENSSFLERSFVCRFRCLLDNSSGFLALNIQGRL
KFLHGQNQRQENGGKAPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFTPLACDAK
GKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTKENRWKWV
QANARLVYKNGKPDYIIATQRPLLDEEGGEHLRKRSMHLPFTYATGEALLYQSNHPIAGF
IDGGHEKNGSKSKKSRTERLVRDGLDPGSLLGALMSQDESVYVCQPALEPKMSFHGSFFG
EQIGFSDSEPSSLHRSWDQASNGVVGPGLTEPNISFDPLLATLDSLSLESQGVADAEEGS
CSNGELFGALEGLGLSAEDLELLLLDERMIRVEMDPERVPTLDDLLTNDEILSYIYDSIE
GKNDSTEHGEQMPPSTASATATTVSLPESNPTSDTNVQMQFPHHKPPLVGQAPIVQLSQQ
MQQHLSMRTGKVAHDWGHQNDHLANTIVNGELLGQNQSIPNGQWTAQDILTSAGIQLEHF
NTQQTIFTGKASELDGELHQQQTHQPYLQQQQSRMQNQLSQQYHAKQKAANLNGLCGISS
TEHPAGKSQWQDYGFSESLGSNPCLDNSQKPLTNTSLDSCMDYSMRDIDNADYTISGSGL
FGRSGQQHGAESMVSSFQGMNHKLPQDQIPVPLAQVISSLSQCPPPNASLEQILGVGKPC
RQLDHYGMVTSEIPHDPNHSKMENGCILNSTYSGGCALPNGNEPAPPAVQIPGPETLSSL
PDPPATGFYL
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgggacgcaagaggagaaaaccagttcagagagcggtgaagcagtcaacagcc
gaaggggccaaatccaacccgtccaaacggcacagagaccggctgaatggagagctggag
cgcttggccagcttgctgcctttccctgaagaggtcaccgccagtctggacaaactctcc
atcctccgtctgagtgtcagctacctgcgagccaagaacttcttctctgtcgccctgaac
aatcgaaacggagtgactccagactgtgcgaatgatgacgacagcaaaacagcaggagtg
gtggagtccaagatccctgagggggaacttttgctgcaggctctcaatgggtttgtcctg
gttatcactgccagcgggactatcttctattcctctcacaccatccaggactacttggga
ttccaccagacggacgtcatgcatcagagtgtgtatgagctggttcatacagaggaccag
caagagctcaggagaaacttgcactgggctttgaatcctcctcctgccactgcatctaac
aatacccaggactctccccaagagatagaacctgacagcagctcatctctggtcacctac
aaccctgaacagcttcccccagaaaactcgtccttcttggagaggagctttgtgtgtcgt
tttcgctgcctgctggacaactcctcaggctttctggctttgaacatccaaggcaggctc
aagtttctgcatggacagaaccagcggcaagaaaacggaggaaaggccccaccgcagctt
gccctttttgccatcgcaactcctctacagcctccgtccatcctggagatcagaaccaag
aacatgatcttcagaaccaaacacaagctggacttcacacccttagcctgtgatgcaaag
gggaaaatagttttggggtacacagaggctgaactgcgggtacgcggatctggctatcag
ttcatccatgcagcagatatgttgtactgtgcagagaaccatgtcagaatgatgaagact
ggagagagtggtctgactgtgttcaggctcctcaccaaggagaatcgctggaaatgggtt
caggctaatgcaagactggtatacaagaatggcaaaccagactacatcatcgccacccag
aggcctcttttggatgaagagggaggagaacacttgcgtaagcgctccatgcatctaccc
tttacctatgccacaggtgaggctctgctctaccagtccaaccatcccattgcaggcttt
atagatggaggccatgagaaaaatggcagtaagtccaagaagagccggacagaaaggctg
gtgagggatggtctggaccctggctcccttctcggggcacttatgagtcaggatgaatcg
gtctatgtttgccagcctgctctggagcccaaaatgtccttccatggcagcttctttgga
gaacaaattggcttctctgactcagaaccctccagtttgcacaggagctgggatcaggca
agcaatggtgtggtgggtccaggcctcacagagccaaacataagctttgacccactgctg
gctactttggactccctctccttggaaagccaaggtgttgcagatgcagaagaggggagc
tgttcaaatggtgagctgtttggagctctggaggggttggggctgagtgctgaggatctg
gagctgctgttgctggatgagcggatgatcagagttgagatggaccctgaacgtgtgccc
actttggatgacctgctgacaaatgatgagatcctttcatatatatacgactccatagag
ggaaagaatgattccacagaacatggagaacagatgcctcctagtacagcctcagcgaca
gctacaacagtgtcactacctgagagtaaccccacatctgacactaatgtgcaaatgcag
tttcctcaccataagcctcccctggtggggcaggctcccatcgtccagctgtcccagcag
atgcagcagcacctcagcatgcgaacgggtaaagtggcacacgactggggccaccagaat
gaccatttggcaaacacaatagttaatggggaactgctaggacaaaaccaatctattccc
aatggacaatggacagcccaagacattctaaccagtgcagggatacaactggaacacttt
aacacacaacagactattttcactggcaaggcatcagagctggatggtgagctgcatcag
cagcaaacacatcaaccctacctgcagcagcagcaatccaggatgcagaaccaactttca
cagcagtaccatgccaaacagaaggcagccaacctcaatggactatgtggcatctccagc
acagagcatccagctgggaaatcccagtggcaggactatggattcagtgagagtctgggc
agcaacccctgccttgataacagccaaaaacctcttacaaacacctcactggattcttgc
atggattatagtatgcgtgatattgacaatgcagattacacaattagtggaagtggtttg
ttcggaaggagtgggcaacagcacggggcagagtccatggtttcatccttccaggggatg
aaccacaaactgccgcaggaccagattccagttcctttggcccaggtaatctccagcctg
tcgcagtgccctccccccaacgcctccttggagcagatcctaggtgtgggcaagccctgc
cggcagctggaccattatggcatggttacctcagagatccctcatgatcccaatcatagt
aagatggagaatggctgcatcctgaacagtacttactcagggggctgtgctctgcccaat
ggaaatgaaccagcgccccctgccgtccagatacctggccctgagactttgtccagcctc
cctgacccaccagccaccggcttctacctctga
DBGET
integrated database retrieval system
