Lates calcarifer (barramundi perch): 108873124
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Entry
108873124 CDS
T04895
Symbol
ahr1b
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108873124 (ahr1b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108873124 (ahr1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Motif
Other DBs
NCBI-GeneID:
108873124
NCBI-ProteinID:
XP_050921995
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Position
LG7_2:1538033..1562338
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AA seq
888 aa
AA seq
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MYAGRKRRKPAQKGVKSTPAEGAKSNPSKRHRDRLNSELDRLASLLPFSDDVISSLDKLS
ILRLSVSFLRTKSFFSVALKNQLSNGMNKGGDHHDDGKMTGSADGRVPEGELLLQALNGF
ILVVTAEGIIFFCSHTIQDYLGFHQTDVMHQSVFELIHTEDQQEFRRNLHWALNPPTSLR
SPTDPSTDGDSVSTSPCLVSYNPDQLPPENSSFLERGFVCRFRCLLDNSSGFLALNIQGR
LKFLHGQSRQRCDSTEDGTPPPPPPQLALFAIATPLQPPAILEIRTRNMIFRTKHKLDFT
PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK
DNRWKWVQANARLVYKNGKPDYIIATQRPLADEEGGEHLRKRSMHLPFTFATGEALLYQT
GYPLHGFPDSFQGKAKGSKSKKGKPDKSAADELDPKSLLGALMSQDESVYICQPDTEPKM
SYHSSLFSEQQSETGGFSGLLSSDSWPIVSNGEMGRCNGKTSSYDPLLATLDSLSLDGDE
TCSNSELFSALENLGLNAEDLELLLLDERMIQVELDPNHVPTLSDLLTNNEILSYIHDSL
ESGTEGEEDRGGFGPAQSVPQQVCLTPAVPPPIVQLSQQMQQHTQIQAVSQPGTTDANSH
WVVSTENHHHPHAVLRPSQLNGEHKHLNSHLESSQQWQQLQPHQQVSSQSFQSHFAVTTN
RSYIPNGHAAFPTNMEVSHMGYSVSNTPHTGGTGLNGLTTPDIYHYQRPCQLQGHHKHQH
EQQQMLQQTQVPPSCLSQCPTQSSGLDLEQLLGLSQPSLEAYSMFNTGAEDTTHSKVENG
CLLSATNAAYIRTCLMPNGNGVATDDIPVSRPEGLPALQDPQKSGFFL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacggaaaagaagaaaacctgcgcagaagggagtcaagtcgacccctgcc
gaaggcgccaagtctaacccgtccaaacgccaccgcgaccgcctgaactcggagctggac
cggcttgccagcctgctgcccttctccgacgacgtcatctccagcctggacaagctgtcc
atcctgaggctcagcgtcagcttcctccgcacaaagagcttcttctcagtggcgctgaag
aaccagctgtccaatggcatgaacaaaggaggcgatcaccatgacgacggcaagatgaca
ggatctgcagacggtcgcgtacctgagggggagctgctgctgcaggccctgaacggcttc
atcctcgtggtgacggctgagggaatcatcttcttctgctcccacaccatccaggattac
ctcggcttccatcagactgacgtgatgcatcagagtgtgtttgagctgatccacactgaa
gaccagcaggagttcaggaggaacctgcactgggccctgaacccccccaccagcctccga
tcccccacagatccctcaacagatggcgattcagtgtcgacctctccctgcctggtgagc
tacaaccccgaccagcttcctcccgaaaactcgtctttcctggagagaggcttcgtctgc
cgcttccgctgtttgttggacaactcctccggcttcctggcgttgaacatccagggtcgg
ctgaagttcctccacggtcagagccgtcagcgctgcgacagcacagaggacggtacaccg
ccgccgccgcctcctcagctcgccctcttcgccatcgcgacgccccttcagcctccagcc
atcctggaaatcaggacgaggaacatgatcttcaggaccaagcacaagctcgacttcacg
ccaatggcctgcgacgcaaagggtaaaatcgttctgggatacaccgaggcggagctgagg
gttcgtggttcgggttaccagttcatccacgccgctgacatgttgtactgtgccgagaat
cacgtccgaatgataaagaccggagagagcggcctcaccgtcttcaggctgctcaccaag
gacaaccggtggaagtgggtccaggccaacgcccggctcgtctacaagaacggaaagcca
gactacatcatcgccacccagaggcctttagcggatgaggaaggaggggaacacctgagg
aaacgatctatgcacctccctttcaccttcgccaccggagaggccctgctctaccagacc
ggatacccgctgcacggcttccccgactccttccagggcaaagccaaaggcagcaagtcc
aaaaagggcaaaccggacaagagcgccgcagacgaactggacccaaagtccctgctggga
gcgctcatgagccaggatgagtcggtgtacatctgccagccggacacagagccgaagatg
tcctaccacagcagccttttcagcgagcaacaaagcgagactggcggtttcagcgggttg
ttgagcagcgacagctggcccatcgtatctaacggggagatggggaggtgcaatggtaaa
acgtccagctacgacccgctgctcgccactctggactccctgtccctagacggcgacgag
acgtgctccaacagcgagctcttcagtgctctggagaacctgggtctgaatgccgaagac
ttggagctcctgctgcttgacgagaggatgatccaggtggagctggaccccaaccacgtc
cccaccctcagcgacctcctcaccaacaatgaaatcctctcctacatccacgactccctg
gagagcggcaccgagggagaggaggacagaggtgggttcggaccagcgcagagtgtcccc
cagcaggtgtgtttgacacccgctgtccctccgcccatcgtccagctgtcgcaacagatg
cagcagcacactcagatccaggctgtctcccagcctggaactacagacgccaacagtcac
tgggtggtctcgacagagaaccaccatcacccacatgctgtgctcagaccctcacagctg
aacggcgaacacaaacaccttaactcacacctggagtcgagtcaacagtggcagcagctc
cagccccatcagcaggtaagcagccagagtttccagagccactttgcagtcaccacgaac
agatcttacatcccgaatggacacgccgcctttccaacaaacatggaggtcagccacatg
ggttacagcgtctccaacacgccacacacaggcggcacaggactgaacggcctcaccaca
ccagacatttatcactaccagaggccctgccagctgcagggtcaccacaaacaccagcat
gagcagcagcagatgttgcagcagactcaggttcctccatcttgtttgtcccagtgtccc
acccagagctctgggctcgatttagagcagctgctgggtctatcgcagccgtcgttagag
gcctacagcatgttcaacaccggagcagaggacaccacccacagcaaggtggagaacggc
tgcctcctcagtgccaccaatgcagcgtacatcaggacgtgtctgatgcccaacggaaac
ggagtggcgacggacgacatccctgtctcacgccccgaaggactccccgctctacaggac
ccccagaaatctggatttttcctctga
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