KEGG   Lates calcarifer (barramundi perch): 108877566
Entry
108877566         CDS       T04895                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03020  RNA polymerase
lcf03420  Nucleotide excision repair
lcf04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108877566
  09124 Replication and repair
   03420 Nucleotide excision repair
    108877566
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108877566
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcf03021]
    108877566
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108877566
Transcription machinery [BR:lcf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108877566
  RNA polymerase III system
   RNA polymerase III
     108877566
  RNA polymerase I system
   RNA polymerase I
     108877566
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108877566
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 108877566
NCBI-ProteinID: XP_018523160
LinkDB
Position
LG11:16867438..16869543
AA seq 127 aa
MSDNEDNFDDGDFDDAEEDEGLDDLENVEDDDQENVQILPAGEGQQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaagacaacttcgacgatggagatttcgatgatgccgaggaagatgag
ggattagatgacctcgaaaacgtggaagatgatgatcaggagaatgtgcagatcctgcca
gcaggagagggtcagcaggcgaaccagaagaggatcacaacaccgtacatgaccaaatat
gagagagccagagtgctgggaacacgagctctccagatagcgatgtgtgctccagtcatg
gtggagctggagggagaaacagaccccttgcaaatagctatgaaagagcttaagagcaga
aagattcctatcatcatccgcaggtaccttcctgatgggagttatgaggactggggttgt
gatgagctcatcataactgattaa

DBGET integrated database retrieval system