Lates calcarifer (barramundi perch): 108880421
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Entry
108880421 CDS
T04895
Name
(RefSeq) acetoacetyl-CoA synthetase
KO
K01907
acetoacetyl-CoA synthetase [EC:
6.2.1.16
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00280
Valine, leucine and isoleucine degradation
lcf00650
Butanoate metabolism
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108880421
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
108880421
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcf01004
]
108880421
Enzymes [BR:
lcf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.16 acetoacetate---CoA ligase
108880421
Lipid biosynthesis proteins [BR:
lcf01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
108880421
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
ACAS_N
Motif
Other DBs
NCBI-GeneID:
108880421
NCBI-ProteinID:
XP_018527472
UniProt:
A0A4W6EH00
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Position
LG13:complement(3085747..3119848)
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AA seq
676 aa
AA seq
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MSKDTEGKSEKIMDMESKVLWYPDSKRNTQMDKFRIQVNGDYGLNLVNYNDLYQWSVDSY
PEFWAEVWRFSGIVSSKPYEEVVDASKRISDIPEWFKGARLNYAENLLKHADQDKVALYA
AREANEEILKVTFGELKRDVALFAAAMRKMGVQTGDRVVGYLPNGIHAVEAMLAAASIGA
IWSSTSVDFGVNGVLDRFSQIQPKLIFSVAAVVYNGKTHDHMEKLTSVVKGLPDLKKVVV
IPYARSKHETDLSKIPNSIFLDDFLASGCGEGDQFPQLEFEQLPFSHPLFIMYSSGTTGA
PKCMVHSAGGTLIQHLKEHILHGNMTSSDVIIYYTTTGWMMWNWLVSALAVGASVVLYDG
SPLMPTPDVLWNLTDQLGITIFGTGAKWLSVLQERNLKPAETHNLQSLHTILSTGSPLKP
QSYDYVYRCIKSNVLLGSISGGTDIVSCFMGQNPTVPVYRGEIQTRNLGMAVEAWSLDGK
PIWGDSGELVCLKPIPCQPTHFWNDENGSKYHKAYFSTYPGVWAHGDYCKINPKTGGIVM
LGRSDGTLNPNGVRFGSSEIYNIVEAFEEVSDSLCVPQYNTDGEERVILFLKMAPGKPFC
PELVAKIKGAIRKALSARHVPALLLETRDIPYTISGKKVEVAVKQVIAGREVAQRGAFSN
PDSLDLYKNIPELQNF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagacacggaagggaagagcgagaaaattatggatatggagagcaaggtgttg
tggtacccggactccaagaggaacacacagatggacaagtttaggatacaggtcaacggg
gactacggacttaatctggttaactacaatgatctgtaccagtggtcggtggacagctat
ccagagttctgggcagaggtgtggcgcttcagtggaatagtcagctccaaaccatatgaa
gaggtagtggatgcatccaagcggatctcagatattccagagtggttcaaaggggctcga
ctcaactacgctgagaatctgctcaaacatgcagaccaggacaaagtagctctctacgca
gcaagggaggcaaacgaggagattttaaaggtgacgtttggagagctcaagcgtgatgtg
gcattgtttgctgcagccatgaggaaaatgggagtccagactggagatagggttgtaggc
tacctacccaatggtatccatgcagtggaggccatgttagcagcagccagcattggagcc
atttggagctccacatctgtcgactttggagtcaacggtgtccttgacaggttttctcaa
atccagcctaaactgatcttctctgttgctgctgtggtttacaatggcaaaacgcatgac
cacatggaaaaactgaccagtgttgtcaaaggtcttcctgacctgaagaaagtagttgtg
attccctatgctcgctccaaacacgagaccgacctttccaagatccccaacagcatattt
ctagatgatttcttggcatctgggtgtggtgagggcgaccagtttcctcagctggagttt
gagcagcttccatttagtcatcctctgttcatcatgtactcctctggaaccacaggagct
cctaaatgtatggtccactctgctgggggcacgctcatccaacacttgaaggagcacatt
ctccatggcaacatgaccagcagtgatgtcatcatttactacacaacgactggctggatg
atgtggaactggctggtgtctgctctggcagtgggagcctcagtggttttatatgacggt
tcaccactaatgcccacacccgatgtactgtggaacctgacagaccagctgggcatcact
atctttggtactggggccaagtggctgtctgtgctgcaggagaggaacctgaaacccgcg
gaaacacacaacctccagtctctccacaccatcctgtcaactggatctcctctcaaacca
cagagctacgactacgtctaccgctgcatcaagagcaacgtgctactgggctccatctca
ggtggcaccgacatagtgtcatgtttcatgggacagaacccaacagttcctgtgtatcgg
ggcgagatccaaactagaaaccttggcatggctgtggaagcctggagccttgatggtaag
cctatatggggagacagtggtgagcttgtctgtttaaagccaatcccctgccagccaaca
cacttctggaatgatgagaatgggagcaaataccacaaagcatacttttctacatatcct
ggtgtgtgggctcatggagactactgtaaaatcaacccaaagacaggaggcattgtcatg
ctgggcagaagtgacggtacgttgaatcccaacggagtccgatttggcagctcagagatc
tacaacattgtggaggcgtttgaggaagtgtcagacagtctttgcgttccgcagtacaac
acagatggagaagagcgagttattttgttcttaaagatggcacctggtaagcccttctgc
ccggagttggtggcaaagattaaaggagccattagaaaagctctgtctgcccgacacgtc
cctgcgctgctgctggagaccagagacattccttacaccatcagtggcaagaaggttgaa
gtggctgtgaagcaggtgattgcaggccgggaggtggcacagagaggggctttctccaat
cctgattcactggacctctacaagaacattcctgaactgcaaaacttttag
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