Lates calcarifer (barramundi perch): 108880677
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Entry
108880677 CDS
T04895
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5 isoform X1
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108880677
04147 Exosome [BR:
lcf04147
]
108880677
04090 CD molecules [BR:
lcf04090
]
108880677
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
108880677
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108880677
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108880677
Exosomal proteins of bladder cancer cells
108880677
CD molecules [BR:
lcf04090
]
Proteins
108880677
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lcf00537
]
Antigens
108880677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_5
V-set_CD47
Ig_4
Ig_6
BiPBP_C
C2-set_2
Extensin-like_C
PKD
Vault_2
Glyco_hydro_42C
Motif
Other DBs
NCBI-GeneID:
108880677
NCBI-ProteinID:
XP_050932077
LinkDB
All DBs
Position
LG15:complement(9190941..9201455)
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AA seq
616 aa
AA seq
DB search
MDVLFLLYVVSATFAGLSEGAGVLPADSLNAAVGRTVTFTTTLTPQENQFVAWTFDFNNI
ITTNTTSETTAPQYEGRITLDRFTGSLQLRNVSLTDSGEYRVSIISPGGGFYTGQTRLDV
YVPVSNVRVTANSSDLIEFNSSVSLSCSSSGSSLSFLWLNSSSEVTASDRVQLTDGGAIL
TIISVTRYDQGPFRCRVFNPVSNVTSEPVNLSISFGPDNTNLKPSPSQEYYVKGSNISLS
CSAVSRPAAQFQWFLNGDLLTARGPELRLMNIQMNQSGNYSCQAFNNITMRTQTSQPYVV
SVLERISGASVKSSTNQPVDGNSVNLTCEAAGSVFTRQWMKDGSDLILTDNMMLYNEGRV
LSFQPLKKKDSGEYSCKISNPVSSDEAKYVMVVNYGPENVKITGETLIYLQETLKLTCSA
ESTPSASYTWMWNKTEIISYSAELTKVITELSESGNYTCQAMNNVTRRTLSAVHELTVKA
ERPPSCSAGCIAGIVIACLVVVGAAAGGGYYIYKNKKMTKKSNRDTDTRTGGGGQNNAGF
SGSQELNYADIRFFQNSNGGAVQLGPQSNPSEYAQVQVNSGSPAVSSLPTYEVHMQRMQI
PAAQSGTQTYSQVRRN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttatttttactgtatgttgtctctgcgacttttgcaggtttgtctgaagga
gctggtgtgttgccagctgattctctgaatgcagctgttggaagaactgtgacgttcacc
acaacactgactccacaagaaaaccaatttgtggcctggacctttgattttaacaatata
ataaccacaaacacaacttcagagacaactgcaccacagtatgaaggcagaatcaccctt
gacagatttactggatctctgcagctcaggaatgtgtccctcactgacagtggagaatac
agagttagcattatatcacctggtggaggattttatacaggacagaccagactggatgta
tatgtgccagtctccaatgtaagagtgactgccaacagctcagacttgatagagttcaac
agctctgtcagcctgtcctgctcctcctctggatcctccctctctttcctctggctgaac
agcagctctgaggttacagccagtgacagagttcagctcactgatggaggtgccatcctc
actataatcagtgtgacccgctatgaccagggaccattcaggtgtcgtgttttcaatcct
gtcagtaatgtcaccagtgaaccagtaaacctctccatcagctttggcccagataataca
aatttgaagccatctccatcacaagaatactatgtgaaagggtcaaacatcagcctgtca
tgctcagctgtctccagacctgctgcccagtttcagtggtttctgaacggagacttgctg
actgctagaggaccagagctcagactgatgaacattcagatgaatcagagtgggaactac
agctgtcaggcctttaacaacataactatgagaactcagacatctcagccctatgttgtc
tctgtactggagagaatatcaggagcttctgtcaaatcatcaacaaaccagccagttgat
ggaaactcagtcaacttaacctgtgaggctgctggctctgtcttcaccagacagtggatg
aaggatggctcagatctgatcctgactgacaacatgatgctttacaatgagggcagagtg
ttgtcttttcaacctctgaagaaaaaagacagtggagaatattcctgtaaaatcagcaac
cctgtcagcagtgatgaagctaaatacgtcatggttgttaattatggaccagaaaatgtt
aaaatcacaggtgaaactctgatatatttgcaagagaccttaaaattaacctgctctgct
gagtccacaccatctgctagttacacctggatgtggaataagacagagataataagctat
tctgctgagctcactaaagtcatcactgaactttctgagagtggaaactacacctgtcaa
gcaatgaacaatgtaactaggagaacattatctgcagtgcatgaattgactgtaaaagct
gaacgacctccaagttgttctgctggttgtatcgctggaatagtaatcgcttgtcttgtc
gttgttggagctgctgctggtggaggctactatatttataaaaacaaaaaaatgacaaaa
aaatctaatagagacaccgacaccagaacaggaggtggaggccagaacaacgcaggattc
tcaggaagtcaggagctgaactatgcagacatcaggtttttccagaacagcaatggtggg
gcagtccagctggggccacagagtaacccatcagaatatgctcaggtccaagtaaacagc
gggtctcctgcagtatcttcccttcctacctatgaggtccacatgcagcgaatgcagatt
cctgctgctcagtctggtacacaaacttattctcaggtccgcaggaactga
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